Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Write Python script to call R script #3

Closed
BenKaehler opened this issue Oct 8, 2022 · 1 comment
Closed

Write Python script to call R script #3

BenKaehler opened this issue Oct 8, 2022 · 1 comment

Comments

@BenKaehler
Copy link
Owner

Dependencies: #1, #2

Prerequisites:

  1. Python programming.
  2. Understanding of QIIME 2 plugin development.

Write the plugin. It should register a function that calls your R script.

Example: https://github.com/qiime2/q2-dada2/blob/master/q2_dada2/plugin_setup.py.

Background: https://dev.qiime2.org/latest/tutorials/first-plugin-tutorial/.

This was referenced Oct 8, 2022
BenKaehler pushed a commit that referenced this issue Nov 1, 2022
Closes #1 and #3.
@BenKaehler
Copy link
Owner Author

Closed by #12.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant