Add debian package sra-toolkit/2.8.1-2dfsg-2-deb/Dockerfile

BioContainers · Apr 5, 2018 · 6fd5607 · 6fd5607
1 parent d8a3670
commit 6fd5607
Showing 1 changed file with 17 additions and 0 deletions.
diff --git a/sra-toolkit/2.8.1-2dfsg-2-deb/Dockerfile b/sra-toolkit/2.8.1-2dfsg-2-deb/Dockerfile
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+FROM biocontainers/biocontainers:debian-stretch-backports
+MAINTAINER biocontainers <biodocker@gmail.com>
+LABEL    software="sra-toolkit" \ 
+    container="sra-toolkit" \ 
+    about.summary="utilities for the NCBI Sequence Read Archive" \ 
+    about.home="https://github.com/ncbi/sra-tools/" \ 
+    software.version="2.8.1-2dfsg-2-deb" \ 
+    version="1" \ 
+    about.copyright="none claimed" \ 
+    about.license="public-domain" \ 
+    about.license_file="/usr/share/doc/sra-toolkit/copyright" \ 
+    extra.binaries="/usr/bin/abi-dump,/usr/bin/abi-load,/usr/bin/align-info,/usr/bin/bam-load,/usr/bin/cache-mgr,/usr/bin/cg-load,/usr/bin/copycat,/usr/bin/fastdump,/usr/bin/fastq-dump,/usr/bin/fastq-load,/usr/bin/helicos-load,/usr/bin/illumina-dump,/usr/bin/illumina-load,/usr/bin/kar,/usr/bin/kdbmeta,/usr/bin/latf-load,/usr/bin/pacbio-load,/usr/bin/prefetch,/usr/bin/rcexplain,/usr/bin/remote-fuser,/usr/bin/sam-dump,/usr/bin/sff-dump,/usr/bin/sff-load,/usr/bin/sra-pileup,/usr/bin/sra-sort,/usr/bin/sra-stat,/usr/bin/srapath,/usr/bin/srf-load,/usr/bin/test-sra,/usr/bin/vdb-config,/usr/bin/vdb-copy,/usr/bin/vdb-decrypt,/usr/bin/vdb-dump,/usr/bin/vdb-encrypt,/usr/bin/vdb-get,/usr/bin/vdb-lock,/usr/bin/vdb-passwd,/usr/bin/vdb-unlock,/usr/bin/vdb-validate" \ 
+    about.tags=""
+
+ENV DEBIAN_FRONTEND noninteractive
+RUN apt-get update && apt-get install -y sra-toolkit && apt-get clean && apt-get purge && rm -rf /var/lib/apt/lists/* /tmp/*
+USER biodocker