Skip to content

Commit

Permalink
README fix for Rawsamble
Browse files Browse the repository at this point in the history
  • Loading branch information
canfirtina committed May 7, 2024
1 parent 9b8e5bc commit ad5bf88
Showing 1 changed file with 4 additions and 3 deletions.
7 changes: 4 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -163,13 +163,14 @@ rawhash2 -x ava-small -t32 ava.ind test/data/d3_yeast_r94/fast5_files/ > ava.paf

We provide the following presets for Rawsamble to enable the overlapping mode (shown in the help message):

`
Rawsamble Presets:

```bash
Rawsamble Presets:
- ava-viral All-vs-all overlapping for very small genomes such as viral genomes.
- ava-small All-vs-all overlapping for small genomes of size < 500M.
- ava-fast All-vs-all overlapping for large genomes of size > 500M and < 5Gb
- ava-faster All-vs-all overlapping for very large genomes > 5Gb)
`
```

## Potential issues you may encounter during mapping

Expand Down

0 comments on commit ad5bf88

Please sign in to comment.