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Fix sorting of chromosomes due to new typings #206

Merged
merged 2 commits into from
Sep 30, 2022
Merged

Fix sorting of chromosomes due to new typings #206

merged 2 commits into from
Sep 30, 2022

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@thinkh thinkh commented Sep 30, 2022

Developer Checklist (Definition of Done)

Issue

  • All acceptance criteria from the issue are met
  • Tested in latest Chrome/Firefox

UI/UX/Vis

  • Requires UI/UX/Vis review
    • Reviewer(s) are notified (tag assignees)
    • Review has occurred (link to notes)
    • Feedback is included in this PR
    • Reviewer(s) approve of concept and design

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  • Branch is up-to-date with the branch to be merged with, i.e., develop
  • Code is cleaned up and formatted
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  • Integration tests are written (if applicable)

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@thinkh thinkh added type: bug Something isn't working release: patch PR merge results in a new patch version labels Sep 30, 2022
dvvanessastoiber
dvvanessastoiber approved these changes Sep 30, 2022
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Looks good to me, thank you for the changes! 👍

@dvvanessastoiber dvvanessastoiber merged commit 8aa2a8f into develop Sep 30, 2022
ghost pushed a commit that referenced this pull request Sep 30, 2022
@dvvanessastoiber @oltionchampari
@thinkh @dvflorianengertsberger
Release 13.0.1 (#205)
9bcb4ae 
* Pass drug screen when multiple data types are selected

* Clean up code

* Add additional depletion screen scores

Caleydo/tdp_bi_bioinfodb#1364

* orphan import

* Linting and other fixes

* Linting

* prepare next development version 12.0.1-SNAPSHOT

* Replace `gene_map_ensgs` with idtype mapping

Closes Caleydo/tdp_bi_bioinfodb#419

* Replace `gene_map_ensgs` request with native idtype mapping
* Remove python DB view
* Remove `_id` from typing, as it was not returned by the API and was not used previously

* Remove orphan import

* Fix typo in depletion screen score name

* Allow for the domain of the scores to be auto-inferred (#175)

Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>

* Fix Typescript compile errors in `selectionChanged` and `parameterCanged` of ranking views (#191)

* Fix TS errors ranking views

The return value of `selectionChanged` and `parameterCanged` has been typed/changed in datavisyn/tdp_core#725

* Fix data type select in welcome tour (#192)

* Fix outdated dist folder (#194)

* Prepare github changes

* Remove circleci

* prepare next dev version

* Update fontawesome

* refactor: Improve Cypress setup and use Cypress commands.js (#169)

Co-authored-by: Florian Engertsberger <florian.engertsberger@datavisyn.io>
Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>

* Merge visyn_scripts

* prepare next dev version

* Add nowrap to button, add scrollbar to searchbox (#203)

* Show CoExpression messages / errors (#202)

* prepare release 13.0.1

* Fix sorting of chromosomes due to new typings (#206)

* Fix sorting of chromosomes due to new typings

Caused by datavisyn/tdp_core#794

* Add missing dist files

Co-authored-by: oltionchampari <oltion.champari@datavisyn.io>
Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>
Co-authored-by: Champari Oltion <51322092+oltionchampari@users.noreply.github.com>
Co-authored-by: anita-steiner <>
Co-authored-by: Florian Engertsberger <florian.engertsberger@datavisyn.io>
@dvvanessastoiber dvvanessastoiber mentioned this pull request Nov 23, 2022
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dvvanessastoiber added a commit that referenced this pull request Nov 24, 2022
@dvvanessastoiber @oltionchampari
@thinkh @dvflorianengertsberger
Release 13.0.2 (#210)
8497b68 
* Pass drug screen when multiple data types are selected

* Clean up code

* Add additional depletion screen scores

Caleydo/tdp_bi_bioinfodb#1364

* orphan import

* Linting and other fixes

* Linting

* prepare next development version 12.0.1-SNAPSHOT

* Replace `gene_map_ensgs` with idtype mapping

Closes Caleydo/tdp_bi_bioinfodb#419

* Replace `gene_map_ensgs` request with native idtype mapping
* Remove python DB view
* Remove `_id` from typing, as it was not returned by the API and was not used previously

* Remove orphan import

* Fix typo in depletion screen score name

* Allow for the domain of the scores to be auto-inferred (#175)

Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>

* Fix Typescript compile errors in `selectionChanged` and `parameterCanged` of ranking views (#191)

* Fix TS errors ranking views

The return value of `selectionChanged` and `parameterCanged` has been typed/changed in datavisyn/tdp_core#725

* Fix data type select in welcome tour (#192)

* Fix outdated dist folder (#194)

* Prepare github changes

* Remove circleci

* prepare next dev version

* Update fontawesome

* refactor: Improve Cypress setup and use Cypress commands.js (#169)

Co-authored-by: Florian Engertsberger <florian.engertsberger@datavisyn.io>
Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>

* Merge visyn_scripts

* prepare next dev version

* Add nowrap to button, add scrollbar to searchbox (#203)

* Show CoExpression messages / errors (#202)

* Fix sorting of chromosomes due to new typings (#206)

* Fix sorting of chromosomes due to new typings

Caused by datavisyn/tdp_core#794

* Add missing dist files

* prepare next dev version

* Fix score domains (#204)

Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>

* fix: boxplot and matrix domain in aggregated scores (#208)

Fix boxplot and matrix domain in aggregated scores

Fixes Caleydo/tdp_bi_bioinfodb#1402

* fix: domain of gene signature scores (#209)

Caleydo/tdp_bi_bioinfodb#1402

* fix: rename AVANA to Avana

* prepare release 13.0.2

Co-authored-by: oltionchampari <oltion.champari@datavisyn.io>
Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>
Co-authored-by: Champari Oltion <51322092+oltionchampari@users.noreply.github.com>
Co-authored-by: anita-steiner <>
Co-authored-by: Florian Engertsberger <florian.engertsberger@datavisyn.io>
dvvanessastoiber added a commit that referenced this pull request Dec 13, 2022
@dvvanessastoiber @oltionchampari
@thinkh @dvflorianengertsberger
Release 13.0.3 (#211)
6d25fde 
* Pass drug screen when multiple data types are selected

* Clean up code

* Add additional depletion screen scores

Caleydo/tdp_bi_bioinfodb#1364

* orphan import

* Linting and other fixes

* Linting

* prepare next development version 12.0.1-SNAPSHOT

* Replace `gene_map_ensgs` with idtype mapping

Closes Caleydo/tdp_bi_bioinfodb#419

* Replace `gene_map_ensgs` request with native idtype mapping
* Remove python DB view
* Remove `_id` from typing, as it was not returned by the API and was not used previously

* Remove orphan import

* Fix typo in depletion screen score name

* Allow for the domain of the scores to be auto-inferred (#175)

Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>

* Fix Typescript compile errors in `selectionChanged` and `parameterCanged` of ranking views (#191)

* Fix TS errors ranking views

The return value of `selectionChanged` and `parameterCanged` has been typed/changed in datavisyn/tdp_core#725

* Fix data type select in welcome tour (#192)

* Fix outdated dist folder (#194)

* Prepare github changes

* Remove circleci

* prepare next dev version

* Update fontawesome

* refactor: Improve Cypress setup and use Cypress commands.js (#169)

Co-authored-by: Florian Engertsberger <florian.engertsberger@datavisyn.io>
Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>

* Merge visyn_scripts

* prepare next dev version

* Add nowrap to button, add scrollbar to searchbox (#203)

* Show CoExpression messages / errors (#202)

* Fix sorting of chromosomes due to new typings (#206)

* Fix sorting of chromosomes due to new typings

Caused by datavisyn/tdp_core#794

* Add missing dist files

* prepare next dev version

* Fix score domains (#204)

Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>

* fix: boxplot and matrix domain in aggregated scores (#208)

Fix boxplot and matrix domain in aggregated scores

Fixes Caleydo/tdp_bi_bioinfodb#1402

* fix: domain of gene signature scores (#209)

Caleydo/tdp_bi_bioinfodb#1402

* fix: rename AVANA to Avana

* prepare next dev version

* add: missing dist files

* prepare release 13.0.3

Co-authored-by: oltionchampari <oltion.champari@datavisyn.io>
Co-authored-by: Holger Stitz <holger.stitz@datavisyn.io>
Co-authored-by: Champari Oltion <51322092+oltionchampari@users.noreply.github.com>
Co-authored-by: anita-steiner <>
Co-authored-by: Florian Engertsberger <florian.engertsberger@datavisyn.io>
@thinkh thinkh deleted the thinkh/fix-sort-chromosome branch June 16, 2023 06:35
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