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This repository has been archived by the owner on Feb 6, 2024. It is now read-only.
Hi All,
Im currently trying to construct a tree with data from two files. I have run the files individually with no issue. My partition file is as follows:
begin sets;
charset part1 = file.aln: *;
charset part2 = file2.fa: *;
charpartition mine = model:part1, model:part2;
end;
The command is
iqtree -spp test.nex
I then get the following error:
Reading partition model file test.nex ...
Reading partition part1 (model=model, aln=file.aln, seq=DNA, pos= *) ...
Reading alignment file file.aln ... ERROR: Cannot read file file.aln
I have used this file in a single data analysis (not partitioned) with no issue so I dont know what this is happening.
Thanks
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