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ConesaLab - Genomics of gene expression

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  1. SQANTI3 SQANTI3 Public

    Tool for the Quality Control of Long-Read Defined Transcriptomes

    HTML 197 48

  2. MultiPower MultiPower Public

    Statistical power studies for multi-omics experiments.

    R 30 10

  3. tappAS tappAS Public

    This repository contains the source code for the tappAS application. See README for details.

    Java 16 2

  4. acorde acorde Public

    Isoform co-usage networks from single-cell RNA-seq data

    HTML 14 2

  5. TCR_nextflow TCR_nextflow Public

    Nextflow 12 2

  6. SQANTI SQANTI Public

    Python 10 3

Repositories

Showing 10 of 25 repositories
  • IsoAnnot Public
    ConesaLab/IsoAnnot’s past year of commit activity
    Python 5 0 0 0 Updated Oct 2, 2024
  • SQANTI3 Public

    Tool for the Quality Control of Long-Read Defined Transcriptomes

    ConesaLab/SQANTI3’s past year of commit activity
    HTML 197 GPL-3.0 48 20 4 Updated Oct 1, 2024
  • MOSim Public

    Bulk and single-cell Multi-Omics ground truth Simulator in R

    ConesaLab/MOSim’s past year of commit activity
    R 9 1 0 0 Updated Jul 11, 2024
  • paintomics4 Public
    ConesaLab/paintomics4’s past year of commit activity
    JavaScript 6 GPL-3.0 0 0 1 Updated May 14, 2024
  • beanTFBSs Public
    ConesaLab/beanTFBSs’s past year of commit activity
    R 0 0 0 0 Updated May 2, 2024
  • SQANTI-SIM Public

    A simulator of controlled transcript novelty for lrRNA-seq benchmark

    ConesaLab/SQANTI-SIM’s past year of commit activity
    HTML 6 GPL-3.0 1 0 0 Updated Apr 29, 2024
  • Coxmos Public

    Survival Analyses for High Dimensional Data

    ConesaLab/Coxmos’s past year of commit activity
    HTML 2 CC-BY-4.0 0 0 0 Updated Mar 10, 2024
  • MORE Public

    Discover regulatory relationships for multi-omics data using regression models.

    ConesaLab/MORE’s past year of commit activity
    R 5 1 0 0 Updated Mar 5, 2024
  • acorde Public

    Isoform co-usage networks from single-cell RNA-seq data

    ConesaLab/acorde’s past year of commit activity
    HTML 14 GPL-3.0 2 0 0 Updated Feb 21, 2024
  • RColorConesa Public

    Conesa Palette for R

    ConesaLab/RColorConesa’s past year of commit activity
    R 5 0 0 0 Updated Sep 13, 2023
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