NEWS

CHANGES IN VERSION 0.99.18
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	* Many minor updates to comply with Bioconducter review

CHANGES IN VERSION 0.99.8
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	* New attempt with Bioconducter
	* Many updates
	* Make_count now support chunking and on-disk procesing for low-end systems
	* More efficient Examples
	* Minor bug corrections
	* Quick start in vignette


CHANGES IN VERSION 0.99.4
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	* Correcting notes from bioconductor reviewer
	* Less time consuming examples and tests 

CHANGES IN VERSION 0.99.3 
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	* Correcting notes from bioconductor reviewer 

CHANGES IN VERSION 0.99.2 
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	* Correcting a few errors/warnings discovered by bioconductor.org

CHANGES IN VERSION 0.99.1 
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	* Preparations for Bioconductor
	* Updates in vignette and manuals to accomodate more autonomous examples
	* Some minor bug fixes and changes to the reanno workflow 

CHANGES IN VERSION 0.99.0 
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	* Due to rules for Bioconductor submissions version number was decreased 

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--Biocundoctor submisson ----------
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CHANGES IN VERSION 1.1.1
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	* First hard release August 2021  

CHANGES IN VERSION 1.0.4 
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	* Major updates to accomodate package specific tests, and devtools/BiocCheck 
	* S4 compatability	
	* merge_lanes can now merge flowcell lanes
	* make_conv can now generate conversion tables between for example UCSC, NCBI and Ensembl chromosome names 

CHANGES IN VERSION 1.0.3
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	* Streamlined PAC generation and annotation
	* Vignette update	
 
CHANGES IN VERSION 1.0.2
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	* The fundation of functions for sequence-based counting and annotation is set.   	

CHANGES IN VERSION 1.0.1 
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	* First github version in 2020
	* Working version for constructing PAC objects (S3)