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ClinVar entry exclusion rules? #278

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ravwojdyla opened this issue Sep 23, 2021 · 0 comments
Open

ClinVar entry exclusion rules? #278

ravwojdyla opened this issue Sep 23, 2021 · 0 comments

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@ravwojdyla
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👋 I've stumbled upon a missing RCV (specifically RCV000032663), and was wondering what was the criteria for the exclusion in EVA-OT? Going over the history/issues, I've noticed an issue from 2020: #160, which stats:

`RCV000003535 is missing because it lacks chromosomal coordinates (CHROM/POS/REF/ALT)

RCV000032663 in my case, is missing chromosomal coordinates as well, so that likely led to its exclusion? I was wonder if there's a documentation (apart from the code itself) somewhere that lists all the requirements for ClinVar entires to pass EVA-OT pipeline?

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