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@FunctionLab

Troyanskaya Laboratory

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  1. onboarding onboarding Public

    Information for new Troyanskaya lab members

    4 1

  2. function function Public

    Python library for functional genomics

    Python 4 4

  3. selene selene Public

    a framework for training sequence-level deep learning networks

    Jupyter Notebook 367 87

  4. ExPecto ExPecto Public

    predicting expression effects of human genome variants ab initio from sequence

    Python 116 41

  5. sleipnir sleipnir Public

    C++ 3 1

Repositories

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  • SPEEDI Public

    Single-cell Pipeline for End to End Data Integration (SPEEDI)

    FunctionLab/SPEEDI’s past year of commit activity
    R 0 0 1 0 Updated Jun 15, 2024
  • onboarding Public

    Information for new Troyanskaya lab members

    FunctionLab/onboarding’s past year of commit activity
    4 1 0 0 Updated May 28, 2024
  • tapioca Public

    a framework for predicting global protein-protein interaction networks from dynamic mass spec data

    FunctionLab/tapioca’s past year of commit activity
    Python 18 BSD-3-Clause-Clear 1 0 1 Updated Mar 20, 2024
  • find_website_network Public

    shiny app for FIND network visualization

    FunctionLab/find_website_network’s past year of commit activity
    R 0 1 0 0 Updated Nov 2, 2023
  • selene Public

    a framework for training sequence-level deep learning networks

    FunctionLab/selene’s past year of commit activity
    Jupyter Notebook 367 BSD-3-Clause-Clear 87 24 2 Updated Oct 31, 2023
  • function Public

    Python library for functional genomics

    FunctionLab/function’s past year of commit activity
    Python 4 GPL-3.0 4 0 2 Updated Jul 6, 2023
  • sei-framework Public

    code to run sei and obtain sei and sequence class predictions

    FunctionLab/sei-framework’s past year of commit activity
    Python 85 6 11 0 Updated Dec 20, 2022
  • sleipnir Public
    FunctionLab/sleipnir’s past year of commit activity
    C++ 3 1 0 0 Updated Jul 11, 2022
  • yenta Public Forked from grapesmoker/yenta

    Yet 'Nother Taskrunner

    FunctionLab/yenta’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 24, 2022
  • sei-manuscript Public

    Code for reproducing the Sei manuscript results

    FunctionLab/sei-manuscript’s past year of commit activity
    Jupyter Notebook 15 3 1 0 Updated Jan 25, 2022
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