added coordinates

GMOD · Feb 14, 2019 · 4d05af4 · 4d05af4
1 parent 0fb5191
commit 4d05af4
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Showing 2 changed files with 14 additions and 3 deletions.
diff --git a/client/apollo/js/View/Track/AnnotTrack.js b/client/apollo/js/View/Track/AnnotTrack.js
@@ -5890,12 +5890,16 @@ define([
                             information += "Unique id: " + feature.uniquename + "<br/>";
                             information += "Date of creation: " + feature.time_accessioned + "<br/>";
                             information += "Owner: " + feature.owner + "<br/>";
+                            information += "Location: " + feature.location+ "<br/>";
+                            if(feature.length){
+                                information += "Length: " + feature.length+ "<br/>";
+                            }
                             if (feature.parent_ids) {
                                 information += "Parent ids: " + feature.parent_ids + "<br/>";
                             }
                         }
                         if (feature.justification) {
-                            information += "Justification: " + feature.justification + "<br/>";
+                            information += "Comment: " + feature.justification + "<br/>";
                         }
                         track.openDialog("Annotation information", information);
                     },

diff --git a/grails-app/controllers/org/bbop/apollo/AnnotationEditorController.groovy b/grails-app/controllers/org/bbop/apollo/AnnotationEditorController.groovy
@@ -462,9 +462,16 @@ class AnnotationEditorController extends AbstractApolloController implements Ann
             String uniqueName = jsonFeature.getString(FeatureStringEnum.UNIQUENAME.value);
             Feature gbolFeature = Feature.findByUniqueName(uniqueName)
             JSONObject info = new JSONObject();
-            info.put(FeatureStringEnum.UNIQUENAME.value, uniqueName);
+            info.put(FeatureStringEnum.UNIQUENAME.value, uniqueName)
             info.put("time_accessioned", gbolFeature.lastUpdated)
-            info.put("owner", gbolFeature.owner ? gbolFeature.owner.username : "N/A");
+            info.put("owner", gbolFeature.owner ? gbolFeature.owner.username : "N/A")
+            info.put("location", gbolFeature.featureLocation.fmin)
+            if(gbolFeature instanceof SequenceAlterationArtifact){
+                info.put("length", gbolFeature.offset)
+            }
+            if(gbolFeature instanceof SequenceAlteration && gbolFeature.alterationResidue){
+                info.put("length", gbolFeature?.alterationResidue?.size())
+            }
             String parentIds = "";
             featureRelationshipService.getParentForFeature(gbolFeature).each {
                 if (parentIds.length() > 0) {