Disable derives from

GMOD · Oct 19, 2022 · 53695c0 · 53695c0
1 parent b031dec
commit 53695c0
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Showing 5 changed files with 7 additions and 6 deletions.
diff --git a/plugins/gff3/package.json b/plugins/gff3/package.json
@@ -39,7 +39,7 @@
   "dependencies": {
     "@flatten-js/interval-tree": "^1.0.15",
     "@gmod/bgzf-filehandle": "^1.4.3",
-    "@gmod/gff": "^1.2.0",
+    "@gmod/gff": "^1.2.2",
     "@gmod/tabix": "^1.5.2"
   },
   "peerDependencies": {

diff --git a/plugins/gff3/src/Gff3Adapter/Gff3Adapter.ts b/plugins/gff3/src/Gff3Adapter/Gff3Adapter.ts
@@ -42,6 +42,7 @@ export default class extends BaseFeatureDataAdapter {
       parseComments: false,
       parseDirectives: false,
       parseSequences: false,
+      disableDerivesFromReferences: true,
     })
 
     const intervalTree = feats

diff --git a/plugins/gff3/src/Gff3TabixAdapter/Gff3TabixAdapter.ts b/plugins/gff3/src/Gff3TabixAdapter/Gff3TabixAdapter.ts
@@ -141,6 +141,7 @@ export default class extends BaseFeatureDataAdapter {
         parseComments: false,
         parseDirectives: false,
         parseSequences: false,
+        disableDerivesFromReferences: true,
       })
 
       features.forEach(featureLocs =>

diff --git a/products/jbrowse-desktop/craco.config.js b/products/jbrowse-desktop/craco.config.js
@@ -53,7 +53,6 @@ module.exports = {
       // worker chunks xref
       // https://github.com/webpack/webpack/issues/13791#issuecomment-897579223
       config.output.publicPath = 'auto'
-      config.cache = false
       return config
     },
   },

diff --git a/yarn.lock b/yarn.lock
@@ -1596,10 +1596,10 @@
     pump "^3.0.0"
     split2 "^4.1.0"
 
-"@gmod/gff@^1.2.0":
-  version "1.2.1"
-  resolved "https://registry.yarnpkg.com/@gmod/gff/-/gff-1.2.1.tgz#4d1e3694f2268215aa6c7bad366be84a1449034d"
-  integrity sha512-YUqPOfoaSfVVXs3Unwph4Ap3NxQIghNtNm+57DEhf+cMeUloFU6v44dKwSUcZZ+PBgAop1BD11QUVSVzmSqNgQ==
+"@gmod/gff@^1.2.2":
+  version "1.2.2"
+  resolved "https://registry.yarnpkg.com/@gmod/gff/-/gff-1.2.2.tgz#f050c24c55a9fe8d4c6543a4dd49bf9dab6fe7c6"
+  integrity sha512-NANwMoilFP3XWTDGFe8NmbOJomHoiuYn6Djq7RoYSXb+kc8CCJIH55EEl1tepyIP6bfGKIOGAqF9+lC3nZUFlQ==
 
 "@gmod/gtf@^0.0.6":
   version "0.0.6"