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Make initial linear synteny view import form submit show all regions by default #4422

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merged 1 commit into from
Jun 6, 2024

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@cmdcolin cmdcolin commented Jun 5, 2024

fixes #4372

alternative approaches or add-ons to this PR could be taken include

a) allowing user to use a refname autocomplete on the import form before submitting
b) allow user to tailor the set of chromosomes displayed in some way (similar to #2063) which could help for very fragmented e.g. hundreds of thousands of scaffolds scenarios

the default output comparing hg19 vs hg38 looks like so after this PR

image

@cmdcolin cmdcolin merged commit 2ecf5b5 into main Jun 6, 2024
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@cmdcolin cmdcolin deleted the minimal_showallregions branch June 6, 2024 02:24
@cmdcolin cmdcolin added the enhancement New feature or request label Jun 17, 2024
@cmdcolin cmdcolin changed the title Show all regions in synteny view after submitting import form Make initial linear synteny view import form submit show all regions by default Jun 17, 2024
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Default initial zoom level for synteny view should be far enough out to show some features
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