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This issue only seems to only have appeared when I switched to using metadata file(s) for my tracks. It also seems to be somewhat intermittent or may go away with a rizes of the track hierarchy pane and page refresh.
It seems that on first load, the height of the div with id=dijit_layout_ContentPane_2 has a height and width set. The effect of the large height, is that the track hierarchy gets bumped down the page a long way:
Also, there is a div with id=dijit_layout_ContentPane_3 which has style="display: none;".
It seems that resizing the width of the track selection hierarchy pane and refreshing the page, results in the dijit_layout_ContentPane_2 div not having a height or width set and thus the "space" disappears. In addition, the dijit_layout_ContentPane_3 div is not created.
The text was updated successfully, but these errors were encountered:
Seem the height of the space is euqal to the height of the window when loaded. I had a bit of a poke around the JavaScript code and tried to do some debugging. I think when the Uncategorised track pane is generated it seems to be using an offsetHeight equal to the window height, in the following code block of ./src/JBrowse/View/TrackList/Hierarchical.js:
onComplete: ()=>{// make a pane at the top to hold uncategorized tracksthis.categories.Uncategorized={pane: newContentPane({className: 'uncategorized'}).placeAt(this.containerNode),tracks: {},categories: {}};if(this.config.categoryOrder){tracks=this.induceCategoryOrder(tracks,this.config.categoryOrder)}this.addTracks(tracks,true);// hide the uncategorized pane if it is emptyif(!this.categories.Uncategorized.pane.containerNode.children.length){this.categories.Uncategorized.pane.domNode.style.display='none';}}
This issue only seems to only have appeared when I switched to using metadata file(s) for my tracks. It also seems to be somewhat intermittent or may go away with a rizes of the track hierarchy pane and page refresh.
Using the following:
My
trackList.json
file contains:URL: http://crobiad.agwine.adelaide.edu.au/dawn/jbrowse/
It seems that on first load, the height of the
div
with id=dijit_layout_ContentPane_2
has a height and width set. The effect of the large height, is that the track hierarchy gets bumped down the page a long way:Also, there is a div with id=
dijit_layout_ContentPane_3
which hasstyle="display: none;"
.It seems that resizing the width of the track selection hierarchy pane and refreshing the page, results in the
dijit_layout_ContentPane_2
div not having a height or width set and thus the "space" disappears. In addition, thedijit_layout_ContentPane_3
div is not created.The text was updated successfully, but these errors were encountered: