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With "description": "":
"description": ""
With "description": "score":
"description": "score"
gff3:
test.gff.txt
##gff-version 3 ##sequence-region Merlin 1 172788 Merlin blast protein_match 752 1039 9.23754e-17 + . _Hit_id=gi|308814559|ref|YP_003934833.1|;_Length=107;_Accession=YP_003934833;_Hit_titles=gi|308814559|ref|YP_003934833.1| hypothetical protein SP18_gp210 [Shigella phage SP18],gi|308206151|gb|ADO19550.1| hypothetical protein SP18gp210 [Shigella phage SP18];_Description=hypothetical protein SP18_gp210 [Shigella phage SP18];ID=biopygen4 Merlin blast match_part 752 1036 . + . Gap=M95;ID=gi|308814559|ref|YP_003934833.1|;Parent=biopygen4 Merlin blast protein_match 752 1039 7.7684e-16 + . _Description=Alt.-3 conserved hypothetical protein [Enterobacteria phage vB_EcoM-VR7];ID=biopygen7;_Hit_id=gi|314121774|ref|YP_004063893.1|;_Accession=YP_004063893;_Hit_titles=gi|314121774|ref|YP_004063893.1| Alt.-3 conserved hypothetical protein [Enterobacteria phage vB_EcoM-VR7],gi|313151531|gb|ADR32587.1| Alt.-3 conserved hypothetical protein [Enterobacteria phage vB_EcoM-VR7];_Length=96 Merlin blast match_part 752 1036 . + . Gap=M95;ID=gi|314121774|ref|YP_004063893.1|;Parent=biopygen7 ### Merlin blast protein_match 752 1039 2.41009e-15 + . ID=biopygen8;_Description=Alt.-3 conserved hypothetical protein [Enterobacteria phage JS98];_Accession=YP_001595321;_Hit_titles=gi|161622625|ref|YP_001595321.1| Alt.-3 conserved hypothetical protein [Enterobacteria phage JS98],gi|52139951|gb|AAU29321.1| Alt.-3 conserved hypothetical protein [Enterobacteria phage JS98];_Length=96;_Hit_id=gi|161622625|ref|YP_001595321.1| Merlin blast match_part 752 1036 . + . ID=gi|161622625|ref|YP_001595321.1|;Gap=M95;Parent=biopygen8 Merlin blast protein_match 752 1036 2.9568e-16 + . _Hit_id=gi|456351278|ref|YP_007501230.1|;_Accession=YP_007501230;_Hit_titles=gi|456351278|ref|YP_007501230.1| hypothetical protein [Salmonella phage S16],gi|448913695|gb|AGE48199.1| hypothetical protein [Salmonella phage S16];_Length=106;_Description=hypothetical protein [Salmonella phage S16];ID=biopygen5 Merlin blast match_part 752 1033 . + . ID=gi|456351278|ref|YP_007501230.1|;Gap=M94;Parent=biopygen5 ### Merlin blast protein_match 752 1036 5.19436e-16 + . _Hit_id=gi|408387127|gb|AFU64136.1|;_Length=96;_Accession=AFU64136;_Hit_titles=gi|408387127|gb|AFU64136.1| hypothetical protein [Salmonella phage STML-198];_Description=hypothetical protein [Salmonella phage STML-198];ID=biopygen6 Merlin blast match_part 752 1033 . + . ID=gi|408387127|gb|AFU64136.1|;Gap=M94;Parent=biopygen6
full track config (from web side):
{ "maxFeatureSizeForUnderlyingRefSeq": 250000, "maxFeatureScreenDensity": 0.5, "glyph": "JBrowse/View/FeatureGlyph/Segments", "maxFeatureGlyphExpansion": 500, "maxHeight": 600, "histograms": { "description": "feature density", "min": 0, "height": 100, "color": "goldenrod", "clip_marker_color": "red" }, "style": { "_defaultHistScale": 4, "_defaultLabelScale": 30, "_defaultDescriptionScale": 120, "showLabels": true, "showTooltips": true, "label": "Description", "description": "", "className": "feature" }, "displayMode": "normal", "events": {}, "menuTemplate": [ { "label": "View details", "title": "{type} {name}", "action": "contentDialog", "iconClass": "dijitIconTask" }, { "iconClass": "dijitIconConnector" }, { "iconClass": "dijitIconFilter" } ], "type": "JBrowse/View/Track/CanvasFeatures", "urlTemplate": "tracks/c3979698f4adbbbdba3d4df03b392167_0/{refseq}/trackData.json", "key": "BlastP", "category": "Blah", "label": "c3979698f4adbbbdba3d4df03b392167_0", "compress": 0, "storeClass": "JBrowse/Store/SeqFeature/NCList", "trackType": "JBrowse/View/Track/CanvasFeatures", "baseUrl": "http://localhost:8000/out/data/", "metadata": {} }
can provide more information on request :)
The text was updated successfully, but these errors were encountered:
Thanks for the catch.
Sorry, something went wrong.
Stringify the description in case a non-string type comes in. See #673
6182912
Looks like this was reproducible and just needed to stringify the label/description! See 6182912
Wow, thanks @cmdcolin!
No branches or pull requests
With
"description": ""
:With
"description": "score"
:gff3:
test.gff.txt
full track config (from web side):
can provide more information on request :)
The text was updated successfully, but these errors were encountered: