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This is a scanner that produces two types of signals. The two signals are calculated from the content of a sliding window. One signal is represented by the self-sequence alignment values and the other is represented by the relative frequency values of Cplus G letters.

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Gagniuc/Information-content-vs-percentage

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Information content vs percentage

Information content vs percentage - is a demonstrative DNA scanner that produces two types of signals. The two signals are calculated from the contents of a user-defined sliding window. One signal is represented by the self-sequence alignment values and the other is represented by the relative frequency values of C plus G letters. Note that the construction and theory behind the chart of this application can be found here.

Live demo

https://gagniuc.github.io/Information-content-vs-percentage/

References

  • Paul A. Gagniuc. Algorithms in Bioinformatics: Theory and Implementation. John Wiley & Sons, Hoboken, NJ, USA, 2021, ISBN: 9781119697961.

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This is a scanner that produces two types of signals. The two signals are calculated from the content of a sliding window. One signal is represented by the self-sequence alignment values and the other is represented by the relative frequency values of Cplus G letters.

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