-
Notifications
You must be signed in to change notification settings - Fork 1
Issues: HenrikBengtsson/aroma.seq
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Author
Label
Projects
Milestones
Assignee
Sort
Issues list
ROBUSTNESS: Add explicit 'stringsAsFactors' arguments [data.frame]
#52
opened May 2, 2020 by
HenrikBengtsson
Analogue to *.gz files, add basic support for *.bgz files (bgzip)
enhancement
#44
opened Jun 24, 2017 by
HenrikBengtsson
FASTA stats: Report on length and MD5 checksum per sequence
enhancement
#38
opened Mar 9, 2016 by
HenrikBengtsson
GcBaseFile: Add getBinWidth() and report it with print()
enhancement
#35
opened Jan 16, 2016 by
HenrikBengtsson
TopHat2 requires Python v 2.7.x - does not work with Python 3
enhancement
#28
opened Sep 28, 2015 by
HenrikBengtsson
REPRODUCIBILITY: Call external tools with <md5 checksum>.<ext> to make file headers stable
enhancement
#25
opened Jul 13, 2015 by
HenrikBengtsson
organism(): Genus species. With and without underscore
enhancement
help wanted
#22
opened May 17, 2015 by
HenrikBengtsson
Is genome assembly important enough to become first class citizen?
enhancement
help wanted
question
#20
opened May 8, 2015 by
HenrikBengtsson
Add getDefaultOrganism(), getOrganism(), and setOrganism()
enhancement
#19
opened May 8, 2015 by
HenrikBengtsson
BamDataFile should report on whether there are paired end reads or not
enhancement
help wanted
question
#16
opened May 6, 2015 by
HenrikBengtsson
Support countNucleotides() for [m]pileup and VCF files too
enhancement
help wanted
#14
opened May 4, 2015 by
HenrikBengtsson
WISH: FastqDataFile and BamDataFile report on read lengths
enhancement
help wanted
question
#13
opened Apr 30, 2015 by
HenrikBengtsson
CNVkit: Add file classes for CNVkit file formats
enhancement
help wanted
#5
opened Apr 19, 2015 by
HenrikBengtsson
Previous Next
ProTip!
Add no:assignee to see everything that’s not assigned.