examples.rst

Examples

The following examples cover typical use cases and should help get a better idea of how to use this package:

.. toctree::
   :maxdepth: 1

   example/rosenbrock.ipynb
   example/conversion_reaction.ipynb
   example/fixed_parameters.ipynb
   example/boehm_JProteomeRes2014.ipynb
   example/petab_import.ipynb
   example/hdf5_storage_result.ipynb
   example/sampler_study.ipynb

Download the examples as notebooks

• :download:`Rosenbrock <example/rosenbrock.ipynb>`
• :download:`Conversion reaction <example/conversion_reaction.ipynb>`
• :download:`Fixed parameters <example/fixed_parameters.ipynb>`
• :download:`Boehm model <example/boehm_JProteomeRes2014.ipynb>`
• :download:`Petab import <example/petab_import.ipynb>`
• :download:`HDF5 storage <example/hdf5_storage_result.ipynb>`
• :download:`Sampler study <example/sampler_study.ipynb>`

Note

Some of the notebooks have extra dependencies.