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Zygote and Flux Illegal inttoptr #50153

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bem981 opened this issue Jun 13, 2023 · 2 comments
Closed

Zygote and Flux Illegal inttoptr #50153

bem981 opened this issue Jun 13, 2023 · 2 comments

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@bem981
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bem981 commented Jun 13, 2023 •
edited by maleadt
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Hello

Julia Version 1.9.0
Commit 8e63055292* (2023-05-07 11:25 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: 4 × Intel(R) Core(TM) i3-6006U CPU @ 2.00GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, skylake)
  Threads: 1 on 4 virtual cores
Environment:
  JULIA_IMAGE_THREADS = 1

I am using Arch Linux with Gnome I installed Julia 1.9 using Pacman
every time I try to add Flux it tells me there is an error Illegal inttopr in zygote
This problem is not on 1.8 and started just after I updated Julia

(@v1.9) pkg> test Zygote
     Testing Zygote
      Status `/tmp/jl_en5ti8/Project.toml`
  [621f4979] AbstractFFTs v1.3.1
  [052768ef] CUDA v4.3.2
  [082447d4] ChainRules v1.51.0
  [d360d2e6] ChainRulesCore v1.16.0
  [cdddcdb0] ChainRulesTestUtils v1.11.0
  [8f4d0f93] Conda v1.9.0
  [b552c78f] DiffRules v1.15.1
  [b4f34e82] Distances v0.10.8
  [7a1cc6ca] FFTW v1.7.0
  [1a297f60] FillArrays v1.1.1
  [26cc04aa] FiniteDifferences v0.12.28
  [f6369f11] ForwardDiff v0.10.35
  [0c68f7d7] GPUArrays v8.7.1
  [46192b85] GPUArraysCore v0.1.5
  [7869d1d1] IRTools v0.4.10
  [2ab3a3ac] LogExpFunctions v0.3.24
  [1914dd2f] MacroTools v0.5.10
  [77ba4419] NaNMath v1.0.2
  [aea7be01] PrecompileTools v1.1.2
  [438e738f] PyCall v1.95.1
  [ae029012] Requires v1.3.0
  [276daf66] SpecialFunctions v2.2.0
  [e88e6eb3] Zygote v0.6.62
  [700de1a5] ZygoteRules v0.2.3
  [8ba89e20] Distributed `@stdlib/Distributed`
  [b77e0a4c] InteractiveUtils `@stdlib/InteractiveUtils`
  [37e2e46d] LinearAlgebra `@stdlib/LinearAlgebra`
  [9a3f8284] Random `@stdlib/Random`
  [2f01184e] SparseArrays `@stdlib/SparseArrays`
  [10745b16] Statistics v1.9.0 `@stdlib/Statistics`
  [8dfed614] Test `@stdlib/Test`
      Status `/tmp/jl_en5ti8/Manifest.toml`
  [621f4979] AbstractFFTs v1.3.1
  [79e6a3ab] Adapt v3.6.2
  [a9b6321e] Atomix v0.1.0
  [ab4f0b2a] BFloat16s v0.4.2
  [fa961155] CEnum v0.4.2
  [052768ef] CUDA v4.3.2
  [1af6417a] CUDA_Runtime_Discovery v0.2.2
  [082447d4] ChainRules v1.51.0
  [d360d2e6] ChainRulesCore v1.16.0
  [cdddcdb0] ChainRulesTestUtils v1.11.0
  [bbf7d656] CommonSubexpressions v0.3.0
  [34da2185] Compat v4.6.1
  [8f4d0f93] Conda v1.9.0
  [9a962f9c] DataAPI v1.15.0
  [e2d170a0] DataValueInterfaces v1.0.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [b4f34e82] Distances v0.10.8
  [ffbed154] DocStringExtensions v0.9.3
  [e2ba6199] ExprTools v0.1.9
  [7a1cc6ca] FFTW v1.7.0
  [1a297f60] FillArrays v1.1.1
  [26cc04aa] FiniteDifferences v0.12.28
  [f6369f11] ForwardDiff v0.10.35
  [0c68f7d7] GPUArrays v8.7.1
  [46192b85] GPUArraysCore v0.1.5
  [61eb1bfa] GPUCompiler v0.20.3
  [7869d1d1] IRTools v0.4.10
  [92d709cd] IrrationalConstants v0.2.2
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.4.1
  [682c06a0] JSON v0.21.4
  [63c18a36] KernelAbstractions v0.9.4
  [929cbde3] LLVM v5.2.0
  [2ab3a3ac] LogExpFunctions v0.3.24
  [1914dd2f] MacroTools v0.5.10
  [77ba4419] NaNMath v1.0.2
  [bac558e1] OrderedCollections v1.6.0
  [69de0a69] Parsers v2.6.0
  [aea7be01] PrecompileTools v1.1.2
  [21216c6a] Preferences v1.4.0
  [438e738f] PyCall v1.95.1
  [74087812] Random123 v1.6.1
  [e6cf234a] RandomNumbers v1.5.3
  [c1ae055f] RealDot v0.1.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
  [708f8203] Richardson v1.4.0
  [6c6a2e73] Scratch v1.2.0
  [276daf66] SpecialFunctions v2.2.0
  [90137ffa] StaticArrays v1.5.26
  [1e83bf80] StaticArraysCore v1.4.0
  [82ae8749] StatsAPI v1.6.0
  [09ab397b] StructArrays v0.6.15
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.10.1
  [a759f4b9] TimerOutputs v0.5.23
  [013be700] UnsafeAtomics v0.2.1
  [d80eeb9a] UnsafeAtomicsLLVM v0.1.2
  [81def892] VersionParsing v1.3.0
  [e88e6eb3] Zygote v0.6.62
  [700de1a5] ZygoteRules v0.2.3
  [4ee394cb] CUDA_Driver_jll v0.5.0+1
  [76a88914] CUDA_Runtime_jll v0.6.0+0
  [f5851436] FFTW_jll v3.3.10+0
  [1d5cc7b8] IntelOpenMP_jll v2023.1.0+0
  [dad2f222] LLVMExtra_jll v0.0.22+0
⌅ [856f044c] MKL_jll v2022.2.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.5+0
  [0dad84c5] ArgTools v1.1.1 `@stdlib/ArgTools`
  [56f22d72] Artifacts `@stdlib/Artifacts`
  [2a0f44e3] Base64 `@stdlib/Base64`
  [ade2ca70] Dates `@stdlib/Dates`
  [8ba89e20] Distributed `@stdlib/Distributed`
  [f43a241f] Downloads v1.6.0 `@stdlib/Downloads`
  [7b1f6079] FileWatching `@stdlib/FileWatching`
  [b77e0a4c] InteractiveUtils `@stdlib/InteractiveUtils`
  [4af54fe1] LazyArtifacts `@stdlib/LazyArtifacts`
  [b27032c2] LibCURL v0.6.3 `@stdlib/LibCURL`
  [76f85450] LibGit2 `@stdlib/LibGit2`
  [8f399da3] Libdl `@stdlib/Libdl`
  [37e2e46d] LinearAlgebra `@stdlib/LinearAlgebra`
  [56ddb016] Logging `@stdlib/Logging`
  [d6f4376e] Markdown `@stdlib/Markdown`
  [a63ad114] Mmap `@stdlib/Mmap`
  [ca575930] NetworkOptions v1.2.0 `@stdlib/NetworkOptions`
  [44cfe95a] Pkg v1.9.0 `@stdlib/Pkg`
  [de0858da] Printf `@stdlib/Printf`
  [3fa0cd96] REPL `@stdlib/REPL`
  [9a3f8284] Random `@stdlib/Random`
  [ea8e919c] SHA v0.7.0 `@stdlib/SHA`
  [9e88b42a] Serialization `@stdlib/Serialization`
  [6462fe0b] Sockets `@stdlib/Sockets`
  [2f01184e] SparseArrays `@stdlib/SparseArrays`
  [10745b16] Statistics v1.9.0 `@stdlib/Statistics`
  [fa267f1f] TOML v1.0.3 `@stdlib/TOML`
  [a4e569a6] Tar v1.10.0 `@stdlib/Tar`
  [8dfed614] Test `@stdlib/Test`
  [cf7118a7] UUIDs `@stdlib/UUIDs`
  [4ec0a83e] Unicode `@stdlib/Unicode`
  [e66e0078] CompilerSupportLibraries_jll v1.0.2+0 `@stdlib/CompilerSupportLibraries_jll`
  [deac9b47] LibCURL_jll v7.84.0+0 `@stdlib/LibCURL_jll`
  [29816b5a] LibSSH2_jll v1.10.2+0 `@stdlib/LibSSH2_jll`
  [c8ffd9c3] MbedTLS_jll v2.28.2+0 `@stdlib/MbedTLS_jll`
  [14a3606d] MozillaCACerts_jll v2022.10.11 `@stdlib/MozillaCACerts_jll`
  [4536629a] OpenBLAS_jll v0.3.21+4 `@stdlib/OpenBLAS_jll`
  [05823500] OpenLibm_jll v0.8.1+0 `@stdlib/OpenLibm_jll`
  [bea87d4a] SuiteSparse_jll v5.10.1+6 `@stdlib/SuiteSparse_jll`
  [83775a58] Zlib_jll v1.2.13+0 `@stdlib/Zlib_jll`
  [8e850b90] libblastrampoline_jll v5.7.0+0 `@stdlib/libblastrampoline_jll`
  [8e850ede] nghttp2_jll v1.48.0+0 `@stdlib/nghttp2_jll`
  [3f19e933] p7zip_jll v17.4.0+0 `@stdlib/p7zip_jll`
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
Precompiling project...
  ✗ Zygote
  ✗ Zygote → ZygoteDistancesExt
  80 dependencies successfully precompiled in 193 seconds

ERROR: The following 1 direct dependency failed to precompile:

Zygote [e88e6eb3-aa80-5325-afca-941959d7151f]

Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/root/.julia/compiled/v1.9/Zygote/jl_cNInLD".
Illegal inttoptr
	  %magicptr = ptrtoint {} addrspace(10)* %242 to i64, !dbg !26

[15597] signal (6.-6): Aborted
in expression starting at /root/.julia/packages/Zygote/JeHtr/src/precompile.jl:13
unknown function (ip: 0x7f5859c6626c)
gsignal at /usr/bin/../lib/libc.so.6 (unknown line)
abort at /usr/bin/../lib/libc.so.6 (unknown line)
unknown function (ip: 0x7f5858e7eea5)
unknown function (ip: 0x7f5858fa8a28)
_ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7f5858fa7a58)
_ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7f5858fa8298)
_ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7f5858fa5d21)
unknown function (ip: 0x7f5858f140ff)
unknown function (ip: 0x7f5858f14a9c)
_ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7f5858f0bcda)
_ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc19MaterializationTask3runEv at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7f58543c987b)
_ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7f58543eae8e)
_ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolStringPtrENS0_11SymbolStateE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupENS_8ArrayRefIPNS0_8JITDylibEEENS0_15SymbolStringPtrENS0_11SymbolStateE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupENS_8ArrayRefIPNS0_8JITDylibEEENS_9StringRefENS0_11SymbolStateE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7f5858f0f249)
unknown function (ip: 0x7f5858f10c59)
unknown function (ip: 0x7f5858f11a72)
jl_generate_fptr_impl at /usr/bin/../lib/julia/libjulia-codegen.so.1 (unknown line)
jl_compile_method_internal at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
ijl_apply_generic at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
#166 at ./none:0
iterate at ./generator.jl:47 [inlined]
collect_to! at ./array.jl:840
collect_to_with_first! at ./array.jl:818
unknown function (ip: 0x7f58149918c5)
collect at ./array.jl:792
unknown function (ip: 0x7f581498b306)
prune! at /root/.julia/packages/IRTools/jcpZw/src/passes/passes.jl:181
|> at ./operators.jl:907 [inlined]
#IR#15 at /root/.julia/packages/IRTools/jcpZw/src/ir/wrap.jl:151 [inlined]
IR at /root/.julia/packages/IRTools/jcpZw/src/ir/wrap.jl:146 [inlined]
code_ir at /root/.julia/packages/Zygote/JeHtr/src/compiler/interface.jl:398
unknown function (ip: 0x7f581495cc48)
unknown function (ip: 0x7f585906491c)
unknown function (ip: 0x7f58590640fa)
unknown function (ip: 0x7f585906521b)
unknown function (ip: 0x7f58590660fe)
unknown function (ip: 0x7f5859082572)
unknown function (ip: 0x7f5859082f89)
ijl_toplevel_eval_in at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
unknown function (ip: 0x7f58407e67be)
unknown function (ip: 0x7f58404b67b8)
unknown function (ip: 0x7f58404b68f2)
unknown function (ip: 0x7f58404b690f)
jl_f__call_latest at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
include at /root/.julia/packages/Zygote/JeHtr/src/Zygote.jl:1 [inlined]
macro expansion at /root/.julia/packages/Requires/Z8rfN/src/Requires.jl:40 [inlined]
precompile at /root/.julia/packages/Zygote/JeHtr/src/Zygote.jl:63
macro expansion at /root/.julia/packages/PrecompileTools/0yi7r/src/workloads.jl:74 [inlined]
top-level scope at /root/.julia/packages/Zygote/JeHtr/src/Zygote.jl:84
unknown function (ip: 0x7f585908292c)
unknown function (ip: 0x7f5859082c41)
unknown function (ip: 0x7f5859082f89)
ijl_toplevel_eval_in at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
unknown function (ip: 0x7f58407e67be)
unknown function (ip: 0x7f58404b67b8)
unknown function (ip: 0x7f5840070417)
unknown function (ip: 0x7f5840070642)
unknown function (ip: 0x7f585906491c)
unknown function (ip: 0x7f58590640fa)
unknown function (ip: 0x7f585906521b)
unknown function (ip: 0x7f58590660fe)
unknown function (ip: 0x7f5859082572)
unknown function (ip: 0x7f5859082f89)
ijl_toplevel_eval_in at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
unknown function (ip: 0x7f58407e67be)
unknown function (ip: 0x7f5840865f6e)
unknown function (ip: 0x7f584086642f)
unknown function (ip: 0x7f5840866538)
unknown function (ip: 0x7f58590b0c90)
jl_repl_entrypoint at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
main at /usr/bin/julia (unknown line)
unknown function (ip: 0x7f5859c0084f)
__libc_start_main at /usr/bin/../lib/libc.so.6 (unknown line)
_start at /usr/bin/julia (unknown line)
Allocations: 16054989 (Pool: 16044934; Big: 10055); GC: 22
Stacktrace:
 [1] precompile(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.TTY, kwargs::Base.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:warn_loaded,), Tuple{Bool}}})
   @ Pkg.API /usr/share/julia/stdlib/v1.9/Pkg/src/API.jl:156
 [2] precompile(; name::Nothing, uuid::Nothing, version::Nothing, url::Nothing, rev::Nothing, path::Nothing, mode::Pkg.Types.PackageMode, subdir::Nothing, kwargs::Base.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:warn_loaded,), Tuple{Bool}}})
   @ Pkg.API /usr/share/julia/stdlib/v1.9/Pkg/src/API.jl:171
 [3] top-level scope
   @ none:6
     Testing Precompilation of test environment failed. Continuing to tests
     Testing Running tests...
Illegal inttoptr
	  %magicptr = ptrtoint {} addrspace(10)* %242 to i64, !dbg !26

[15697] signal (6.-6): Aborted
in expression starting at /root/.julia/packages/Zygote/JeHtr/src/precompile.jl:13
unknown function (ip: 0x7fd5112ea26c)
gsignal at /usr/bin/../lib/libc.so.6 (unknown line)
abort at /usr/bin/../lib/libc.so.6 (unknown line)
unknown function (ip: 0x7fd5105d4ea5)
unknown function (ip: 0x7fd5106fea28)
_ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7fd5106fda58)
_ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7fd5106fe298)
_ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7fd5106fbd21)
unknown function (ip: 0x7fd51066a0ff)
unknown function (ip: 0x7fd51066aa9c)
_ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7fd510661cda)
_ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc19MaterializationTask3runEv at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7fd50bbc987b)
_ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7fd50bbeae8e)
_ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolStringPtrENS0_11SymbolStateE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupENS_8ArrayRefIPNS0_8JITDylibEEENS0_15SymbolStringPtrENS0_11SymbolStateE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
_ZN4llvm3orc16ExecutionSession6lookupENS_8ArrayRefIPNS0_8JITDylibEEENS_9StringRefENS0_11SymbolStateE at /usr/bin/../lib/julia/../libLLVM-15.so (unknown line)
unknown function (ip: 0x7fd510665249)
unknown function (ip: 0x7fd510666c59)
unknown function (ip: 0x7fd510667a72)
jl_generate_fptr_impl at /usr/bin/../lib/julia/libjulia-codegen.so.1 (unknown line)
jl_compile_method_internal at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
ijl_apply_generic at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
#166 at ./none:0
iterate at ./generator.jl:47 [inlined]
collect_to! at ./array.jl:840
collect_to_with_first! at ./array.jl:818
unknown function (ip: 0x7fd4cc01c025)
collect at ./array.jl:792
unknown function (ip: 0x7fd4cc015a66)
prune! at /root/.julia/packages/IRTools/jcpZw/src/passes/passes.jl:181
|> at ./operators.jl:907 [inlined]
#IR#15 at /root/.julia/packages/IRTools/jcpZw/src/ir/wrap.jl:151 [inlined]
IR at /root/.julia/packages/IRTools/jcpZw/src/ir/wrap.jl:146 [inlined]
code_ir at /root/.julia/packages/Zygote/JeHtr/src/compiler/interface.jl:398
unknown function (ip: 0x7fd4cbfe73a8)
unknown function (ip: 0x7fd51086491c)
unknown function (ip: 0x7fd5108640fa)
unknown function (ip: 0x7fd51086521b)
unknown function (ip: 0x7fd5108660fe)
unknown function (ip: 0x7fd510882572)
unknown function (ip: 0x7fd510882f89)
ijl_toplevel_eval_in at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
unknown function (ip: 0x7fd4f7de67be)
unknown function (ip: 0x7fd4f7ab67b8)
unknown function (ip: 0x7fd4f7ab68f2)
unknown function (ip: 0x7fd4f7ab690f)
jl_f__call_latest at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
include at /root/.julia/packages/Zygote/JeHtr/src/Zygote.jl:1 [inlined]
macro expansion at /root/.julia/packages/Requires/Z8rfN/src/Requires.jl:40 [inlined]
precompile at /root/.julia/packages/Zygote/JeHtr/src/Zygote.jl:63
macro expansion at /root/.julia/packages/PrecompileTools/0yi7r/src/workloads.jl:74 [inlined]
top-level scope at /root/.julia/packages/Zygote/JeHtr/src/Zygote.jl:84
unknown function (ip: 0x7fd51088292c)
unknown function (ip: 0x7fd510882c41)
unknown function (ip: 0x7fd510882f89)
ijl_toplevel_eval_in at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
unknown function (ip: 0x7fd4f7de67be)
unknown function (ip: 0x7fd4f7ab67b8)
unknown function (ip: 0x7fd4f76c3fae)
unknown function (ip: 0x7fd4f76c41ee)
unknown function (ip: 0x7fd51086491c)
unknown function (ip: 0x7fd5108640fa)
unknown function (ip: 0x7fd51086521b)
unknown function (ip: 0x7fd5108660fe)
unknown function (ip: 0x7fd510882572)
unknown function (ip: 0x7fd510882f89)
ijl_toplevel_eval_in at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
unknown function (ip: 0x7fd4f7de67be)
unknown function (ip: 0x7fd4f7e65f6e)
unknown function (ip: 0x7fd4f7e6642f)
unknown function (ip: 0x7fd4f7e66538)
unknown function (ip: 0x7fd5108b0c90)
jl_repl_entrypoint at /usr/bin/../lib/julia/libjulia-internal.so.1 (unknown line)
main at /usr/bin/julia (unknown line)
unknown function (ip: 0x7fd51128484f)
__libc_start_main at /usr/bin/../lib/libc.so.6 (unknown line)
_start at /usr/bin/julia (unknown line)
Allocations: 16055402 (Pool: 16045343; Big: 10059); GC: 23
ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/root/.julia/compiled/v1.9/Zygote/jl_Rjiocg".
Stacktrace:
 [1] include(fname::String)
   @ Base.MainInclude ./client.jl:478
 [2] top-level scope
   @ none:6
in expression starting at /root/.julia/packages/Zygote/JeHtr/test/runtests.jl:1
ERROR: Package Zygote errored during testing

This is what I got when I tried testing it from REPL
@Keno
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Keno commented Jun 13, 2023

I am using Arch Linux with Gnome I installed Julia 1.9 using Pacman

Make sure to use julia-bin rather than julia. See https://wiki.archlinux.org/title/Julia

@maleadt
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maleadt commented Jun 13, 2023

Adding to what @Keno said, Julia 1.9 only supports LLVM 14, while your non-official builds uses LLVM 15. That's not going to work.

Also see #47768

@maleadt maleadt closed this as not planned Won't fix, can't repro, duplicate, stale Jun 13, 2023
@voroskoi voroskoi mentioned this issue Sep 17, 2023
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@maleadt @Keno @bem981