Strip '*' from protein sequence

KarrLab · Sep 20, 2019 · fab2b7a · fab2b7a
1 parent 6efb79f
commit fab2b7a
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/wc_model_gen/eukaryote/complexation.py b/wc_model_gen/eukaryote/complexation.py
@@ -123,7 +123,7 @@ def gen_reactions(self):
                                     else:
                                         codon_id = codon_table[subunit.species_type.id]    
 
-                                    protein_seq = subunit.species_type.get_seq(table=codon_id, cds=cds)
+                                    protein_seq = subunit.species_type.get_seq(table=codon_id, cds=cds).strip('*')
                                     aa_content = {}
                                     for aa in protein_seq:
                                         aa_id = amino_acid_id_conversion[aa]