Update JGLOBAL_STAGE_IC for cycled mode

Also update wave COM variable

Refs NOAA-EMC#2475

jobs/JGLOBAL_STAGE_IC

@@ -17,9 +17,14 @@ gcyc="${GDATE:8:2}"
 
 # Define MEMDIR_ARRAY
 MEMDIR_ARRAY=()
-if [[ "${RUN:-}" = "gefs" ]]; then
+if [[ "${RUN:-}" = "enkfgdas" || "${RUN:-}" = "gefs" ]]; then
+  if [[ "${RUN:-}" = "gefs" ]]; then
+    ii_start=0
+  elif [[ "${RUN:-}" = "enkfgdas" ]]; then
+    ii_start=1
+  fi
   # Populate the member_dirs array based on the value of NMEM_ENS
-  for ((ii = 0; ii <= "${NMEM_ENS:-0}"; ii++)); do
+  for ((ii = "${ii_start}"; ii <= "${NMEM_ENS:-0}"; ii++)); do
     MEMDIR_ARRAY+=("mem$(printf "%03d" "${ii}")")
   done
 else
@@ -36,6 +41,11 @@ for MEMDIR in "${MEMDIR_ARRAY[@]}"; do
   export MEMDIR
 
   # Declare COMs
+  if [[ "${MODE}" = "cycled" && "${RUN:-}" = "gdas" ]]; then
+    YMD=${PDY} HH=${cyc} declare_from_tmpl -rx COM_ATMOS_ANALYSIS
+    export COM_ATMOS_ANALYSIS
+  fi
+
   if [[ ${EXP_WARM_START:-".false."} = ".true." ]]; then
     RUN=${rCDUMP} YMD=${gPDY} HH=${gcyc} declare_from_tmpl COM_ATMOS_RESTART_PREV:COM_ATMOS_RESTART_TMPL
     RUN=${rCDUMP} YMD=${gPDY} HH=${gcyc} declare_from_tmpl COM_MED_RESTART_PREV:COM_MED_RESTART_TMPL
@@ -53,8 +63,8 @@ for MEMDIR in "${MEMDIR_ARRAY[@]}"; do
     export COM_ICE_RESTART_PREV
   fi
   if [[ "${DO_WAVE:-}" = "YES" ]]; then
-    YMD=${PDY} HH=${cyc} declare_from_tmpl COM_WAVE_RESTART
-    export COM_WAVE_RESTART
+    YMD=${gPDY} HH=${gcyc} declare_from_tmpl COM_WAVE_RESTART_PREV:COM_WAVE_RESTART_TMPL
+    export COM_WAVE_RESTART_PREV
   fi
 
   # Execute staging