improve logging

KrishnaswamyLab · Jun 13, 2018 · 555bac1 · 555bac1
1 parent 143317c
commit 555bac1
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/graphtools/api.py b/graphtools/api.py
@@ -226,5 +226,7 @@ class Graph(parent_classes[0], parent_classes[1], parent_classes[2]):
     # build graph and return
     log_debug("Initializing {} with arguments {}".format(
         parent_classes,
-        params))
+        ", ".join(["{}='{}'".format(key, value)
+                   for key, value in params.items()
+                   if key != "data"])))
     return Graph(**params)
diff --git a/graphtools/graphs.py b/graphtools/graphs.py
@@ -256,8 +256,7 @@ def build_kernel_to_data(self, Y, knn=None):
                 knn_tree = NearestNeighbors(knn, algorithm='brute',
                                             n_jobs=-1).fit(self.data_nu)
             if len(update_idx) > 0:
-                log_debug("radius search on {}".format(search_knn,
-                                                       len(update_idx)))
+                log_debug("radius search on {}".format(len(update_idx)))
                 # give up - radius search
                 dist_new, ind_new = knn_tree.radius_neighbors(
                     Y[update_idx, :],