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@LANL-Bioinformatics

LANL-Bioinformatics

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  1. EDGE EDGE Public

    EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.

    Perl 73 29

  2. PhaME PhaME Public

    Forked from sanahmed/PhaME

    Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to construct a phylogenetic tree. Provides evolutionary analyses (gene…

    Perl 28 14

  3. GOTTCHA GOTTCHA Public

    Forked from poeli/GOTTCHA

    Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Please visit our homepage:

    Perl 23 6

  4. FaQCs FaQCs Public

    Forked from chienchi/FaQCs

    Quality Control of Next Generation Sequencing Data

    C++ 22 8

  5. MeGAMerge MeGAMerge Public

    MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)

    Perl 15 7

  6. ADEPT ADEPT Public

    ADEPT is the only tool to date that dynamically assesses errors within reads by comparing position-specific and neighboring base quality scores with the distribution for the dataset being analyzed.

    Perl 8 4

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