To start comparison
python compare.py --reference_file eval.tagged.txt --hypotheses_dir .The script will consider that recognition results are stored in files having names like eval.target.ner-bert.txt or eval.ner-bert.target.txt if the reference file's name is eval.tagged.txt.
To replace labels in all files:
sed -i ':a;N;$!ba;s/Loc\n/Location\n/g' */*.txt