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When using MultiQC on a JSON file produced by fastp 0.23.4 on paired end reads, it misses the logs.
It's because it's looking for the string '"before_filtering": {' which occurs on line 5, but stops at line 3 (not sure about indexing here).
'"before_filtering": {'
MultiQC/multiqc/utils/search_patterns.yaml
Lines 325 to 328 in 6c613e8
SRR6357070_10.fastp.json
multiqc . /// MultiQC 🔍 | v1.20 | multiqc | Search path : /Users/adam.talbot/multiqc_fastp_bug | searching | ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 100% 6/6 | multiqc | No analysis results found. Cleaning up.. | multiqc | MultiQC complete
The text was updated successfully, but these errors were encountered:
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Description of bug
When using MultiQC on a JSON file produced by fastp 0.23.4 on paired end reads, it misses the logs.
It's because it's looking for the string
'"before_filtering": {'
which occurs on line 5, but stops at line 3 (not sure about indexing here).MultiQC/multiqc/utils/search_patterns.yaml
Lines 325 to 328 in 6c613e8
File that triggers the error
SRR6357070_10.fastp.json
MultiQC Error log
Before submitting
The text was updated successfully, but these errors were encountered: