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fixed some formatting
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wresch committed Feb 7, 2018
1 parent bf8926a commit 88f28e1
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6 changes: 2 additions & 4 deletions exercise01/README.md
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Expand Up @@ -5,12 +5,10 @@ rule Snakemake file (`Snakefile`). One possible solution is given in
**Snakefile.finished**.


<div style="background-color:# FFFACD;">
Snakefiles are basically Python with some extra constructs for defining
rules based workflows. That means that Snakefiles are **whitesspace sensitive** -
:information_source: Snakefiles are basically Python with some extra constructs for defining
rules based workflows. That means that **Snakefiles are whitesspace sensitive** -
indentation matters and tabs and spaces can't be mixed. Code in these examples
uses spaces - no tabs. Please adjust your editors accordingly.
</div>

The script `aln.sh` takes a fastq file as an argument and aligns it to the
S. cerevisiae genome:
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4 changes: 2 additions & 2 deletions exercise05/README.md
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Expand Up @@ -47,8 +47,8 @@ When submitting to the cluster, a number of other of other options are important
- `--jobs`: The number of jobs to run concurrently.
- `--cluster-config`: The cluster config file

<div style="background-color:# FFFACD;">Please don't run snakemake workflows
on the login node, even if submitting jobs as batch jobs. Run the main process as a
:information_source: Please **do not run snakemake workflows on the login node**,
even if submitting jobs as batch jobs. Run the main process as a
batch job itself or, if the workflow runs quickly enough, from an sinteractive
session</div>

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