Port to Orion #5

KateFriedman-NOAA · 2019-12-17T20:51:57Z

Port global-workflow and components to Mississippi machine when available (called Orion).

Branch for work: port2orion (made off of feature/gfsv16b)

Original issue on VLab: https://vlab.ncep.noaa.gov/redmine/issues/67194

Established "glopara" space: /work/noaa/global/glopara

To do list:

KateFriedman-NOAA · 2020-01-09T16:38:09Z

Sync merged feature/gfsv16b into port2orion after testing connection to GitHub on Orion.

KateFriedman-NOAA · 2020-01-09T18:42:47Z

Added new ORION files to workflow: module files (using temp NCEPLIBS) and env file
Added ORION to setup scripts, machine-setup.sh, link script, and configs...used temporary paths for group account space, will need to update later.

Tested setup scripts and they successfully created an EXPDIR, COMROT, configs in EXPDIR, and a rocoto xml in EXPDIR. Don't yet have rocoto available to test xml further.

KateFriedman-NOAA · 2020-03-18T18:38:20Z

Was able to get gaussian_sfcanl.exe to build by manually running each step of build_gaussian_sfcanl.sh but when I run build_gaussian_sfcanl.sh it stops while sourcing the modulefile. Need to investigate further.

KateFriedman-NOAA · 2020-03-18T20:01:54Z

Found cause of build issue for gaussian_sfcanl.exe...variable that defines path to HDF5 libraries in module file had to be updated. The build_gaussian_sfcanl.sh script now works on Orion.

- Remove module files no longer needed for gridbull, navybull, trpsfcmv, overpdtg2, and wintemv - Add Orion blocks to module-setup.csh.inc and module-setup.sh.inc - Update Orion module_base with contrib and rocoto - Update Orion module initilization in machine-setup.sh - Fix syntax error in setup_workflow_fcstonly.py

KateFriedman-NOAA · 2020-03-19T14:48:38Z

Need w3emc_para/2.4.0 library on Orion to build gfs_bufr. @Hang-Lei-NOAA When will NCEPLIBS be set up on Orion? Have you and others from the NCEPLIBS team gotten Orion accounts?

@GeorgeVandenberghe-NOAA Would you be able to add the w3emc_para/2.4.0 library to your set on Orion until the official NCEPLIBS is available? The changes for v16 also require these new libraries if you can add them too:

hdf5_parallel/1.10.6
netcdf_parallel/4.7.4
w3emc_para/2.4.0

Thanks!

GeorgeVandenberghe-NOAA · 2020-03-19T15:04:15Z

I am having trouble getting parallel netcdf to RUN on Orion. Have not run it down yet. It works when the parallel API is disabled (through namelist) at runtime. Have asked others about their results but no response yet. I need a source for w3emc_para.

…

On Thu, Mar 19, 2020 at 10:49 AM Kate Friedman ***@***.***> wrote: Need w3emc_para/2.4.0 library on Orion to build gfs_bufr. @Hang-Lei-NOAA <https://github.com/Hang-Lei-NOAA> When will NCEPLIBS be set up on Orion? Have you and others from the NCEPLIBS team get Orion accounts? @GeorgeVandenberghe-NOAA <https://github.com/GeorgeVandenberghe-NOAA> Would you be able to add the w3emc_para/2.4.0 library to your set on Orion until the official NCEPLIBS is available? The changes for v16 also require these new libraries if you can add them too: - hdf5_parallel/1.10.6 - netcdf_parallel/4.7.4 - w3emc_para/2.4.0 Thanks! — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#5 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ANDS4FRBLNRVNHLHMYWU5ATRIIWFRANCNFSM4J4BLX4Q> .

-- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 George.Vandenberghe@noaa.gov 301-683-3769(work) 3017751547(cell)

Hang-Lei-NOAA · 2020-03-19T15:18:06Z

Hi, All, I will coordinate with MSU to address my access to Orion. Once it is done, it will be installed the same day. Thanks, Hang On Thu, Mar 19, 2020 at 11:04 AM GeorgeVandenberghe-NOAA < notifications@github.com> wrote:

…

I am having trouble getting parallel netcdf to RUN on Orion. Have not run it down yet. It works when the parallel API is disabled (through namelist) at runtime. Have asked others about their results but no response yet. I need a source for w3emc_para. On Thu, Mar 19, 2020 at 10:49 AM Kate Friedman ***@***.***> wrote: > Need w3emc_para/2.4.0 library on Orion to build gfs_bufr. @Hang-Lei-NOAA > <https://github.com/Hang-Lei-NOAA> When will NCEPLIBS be set up on Orion? > Have you and others from the NCEPLIBS team get Orion accounts? > > @GeorgeVandenberghe-NOAA <https://github.com/GeorgeVandenberghe-NOAA> > Would you be able to add the w3emc_para/2.4.0 library to your set on Orion > until the official NCEPLIBS is available? The changes for v16 also require > these new libraries if you can add them too: > > - hdf5_parallel/1.10.6 > - netcdf_parallel/4.7.4 > - w3emc_para/2.4.0 > > Thanks! > > — > You are receiving this because you were mentioned. > Reply to this email directly, view it on GitHub > < #5 (comment) >, > or unsubscribe > < https://github.com/notifications/unsubscribe-auth/ANDS4FRBLNRVNHLHMYWU5ATRIIWFRANCNFSM4J4BLX4Q > > . > -- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 ***@***.*** 301-683-3769(work) 3017751547(cell) — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#5 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AKWSMFDGHLJMPDZQ5GXH3O3RIIX77ANCNFSM4J4BLX4Q> .

KateFriedman-NOAA · 2020-03-19T15:43:52Z

Thanks @Hang-Lei-NOAA and @GeorgeVandenberghe-NOAA ! I just had a tag-up with Arun and will be pausing on Orion for a bit until some issues are resolved (rstprod available, official NCEPLIBS available, group space for me fixed). @Hang-Lei-NOAA Let me know when you gain access to Orion and have NCEPLIBS installed, no urgent rush on this, thanks!

GeorgeVandenberghe-NOAA · 2020-03-19T16:08:19Z

My NCEPLIBS should work. I know of at least two issues where it IS broken, parallel netcdf API, and w3emc-para unavailable. The second should be straightforward. The first will take a long time to run down unless I get help and a testcase smaller than a global GCM which it's probably time to uuhh.. reach out and do.

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On Thu, Mar 19, 2020 at 11:44 AM Kate Friedman ***@***.***> wrote: Thanks @Hang-Lei-NOAA <https://github.com/Hang-Lei-NOAA> and @GeorgeVandenberghe-NOAA <https://github.com/GeorgeVandenberghe-NOAA> ! I just had a tag-up with Arun and will be pausing on Orion for a bit until some issues are resolved (rstprod available, official NCEPLIBS available, group space for me fixed). @Hang-Lei-NOAA <https://github.com/Hang-Lei-NOAA> Let me know when you gain access to Orion and have NCEPLIBS installed, no urgent rush on this, thanks! — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#5 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ANDS4FS6YBHJOZE6UOTYWXTRII4URANCNFSM4J4BLX4Q> .

-- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 George.Vandenberghe@noaa.gov 301-683-3769(work) 3017751547(cell)

GeorgeVandenberghe-NOAA · 2020-03-20T00:36:51Z

My parallel netcdf issues have been resolved. The problem was I built with impi/2018 and ran with impi.2019. switching back to impi/2018 which is less stable at huge task counts, allowed it to run and write compressed netcdf in parallel. Bottom line, I got gfsv162 to build and write hetcdf fast in parallel On Thu, Mar 19, 2020 at 11:02 AM George Vandenberghe - NOAA Affiliate < george.vandenberghe@noaa.gov> wrote:

…

I am having trouble getting parallel netcdf to RUN on Orion. Have not run it down yet. It works when the parallel API is disabled (through namelist) at runtime. Have asked others about their results but no response yet. I need a source for w3emc_para. On Thu, Mar 19, 2020 at 10:49 AM Kate Friedman ***@***.***> wrote: > Need w3emc_para/2.4.0 library on Orion to build gfs_bufr. @Hang-Lei-NOAA > <https://github.com/Hang-Lei-NOAA> When will NCEPLIBS be set up on > Orion? Have you and others from the NCEPLIBS team get Orion accounts? > > @GeorgeVandenberghe-NOAA <https://github.com/GeorgeVandenberghe-NOAA> > Would you be able to add the w3emc_para/2.4.0 library to your set on Orion > until the official NCEPLIBS is available? The changes for v16 also require > these new libraries if you can add them too: > > - hdf5_parallel/1.10.6 > - netcdf_parallel/4.7.4 > - w3emc_para/2.4.0 > > Thanks! > > — > You are receiving this because you were mentioned. > Reply to this email directly, view it on GitHub > <#5 (comment)>, > or unsubscribe > <https://github.com/notifications/unsubscribe-auth/ANDS4FRBLNRVNHLHMYWU5ATRIIWFRANCNFSM4J4BLX4Q> > . > -- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 ***@***.*** 301-683-3769(work) 3017751547(cell)

-- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 George.Vandenberghe@noaa.gov 301-683-3769(work) 3017751547(cell)

GeorgeVandenberghe-NOAA · 2020-03-20T00:45:29Z

Hang. Do you have a source or git location (preferred) for w3emc_para/2.4 so I can build it in my portable location everywhere including orion. On Thu, Mar 19, 2020 at 11:02 AM George Vandenberghe - NOAA Affiliate < george.vandenberghe@noaa.gov> wrote:

…

I am having trouble getting parallel netcdf to RUN on Orion. Have not run it down yet. It works when the parallel API is disabled (through namelist) at runtime. Have asked others about their results but no response yet. I need a source for w3emc_para. On Thu, Mar 19, 2020 at 10:49 AM Kate Friedman ***@***.***> wrote: > Need w3emc_para/2.4.0 library on Orion to build gfs_bufr. @Hang-Lei-NOAA > <https://github.com/Hang-Lei-NOAA> When will NCEPLIBS be set up on > Orion? Have you and others from the NCEPLIBS team get Orion accounts? > > @GeorgeVandenberghe-NOAA <https://github.com/GeorgeVandenberghe-NOAA> > Would you be able to add the w3emc_para/2.4.0 library to your set on Orion > until the official NCEPLIBS is available? The changes for v16 also require > these new libraries if you can add them too: > > - hdf5_parallel/1.10.6 > - netcdf_parallel/4.7.4 > - w3emc_para/2.4.0 > > Thanks! > > — > You are receiving this because you were mentioned. > Reply to this email directly, view it on GitHub > <#5 (comment)>, > or unsubscribe > <https://github.com/notifications/unsubscribe-auth/ANDS4FRBLNRVNHLHMYWU5ATRIIWFRANCNFSM4J4BLX4Q> > . > -- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 ***@***.*** 301-683-3769(work) 3017751547(cell)

-- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 George.Vandenberghe@noaa.gov 301-683-3769(work) 3017751547(cell)

Hang-Lei-NOAA · 2020-03-20T01:04:32Z

hi George The w3emc_para/2.4 has no change in w3emc library. It just compiled with the para-netcdf. You can get the tar file from GitHub necplibs-w3emc repo. With tag2.4.0 Thanks Hang On Thu, Mar 19, 2020 at 8:45 PM GeorgeVandenberghe-NOAA < notifications@github.com> wrote:

…

Hang. Do you have a source or git location (preferred) for w3emc_para/2.4 so I can build it in my portable location everywhere including orion. On Thu, Mar 19, 2020 at 11:02 AM George Vandenberghe - NOAA Affiliate < ***@***.***> wrote: > I am having trouble getting parallel netcdf to RUN on Orion. Have not > run it down yet. It works when the parallel API is disabled (through > namelist) at runtime. > > Have asked others about their results but no response yet. > > I need a source for w3emc_para. > > > On Thu, Mar 19, 2020 at 10:49 AM Kate Friedman ***@***.*** > > wrote: > >> Need w3emc_para/2.4.0 library on Orion to build gfs_bufr. @Hang-Lei-NOAA >> <https://github.com/Hang-Lei-NOAA> When will NCEPLIBS be set up on >> Orion? Have you and others from the NCEPLIBS team get Orion accounts? >> >> @GeorgeVandenberghe-NOAA <https://github.com/GeorgeVandenberghe-NOAA> >> Would you be able to add the w3emc_para/2.4.0 library to your set on Orion >> until the official NCEPLIBS is available? The changes for v16 also require >> these new libraries if you can add them too: >> >> - hdf5_parallel/1.10.6 >> - netcdf_parallel/4.7.4 >> - w3emc_para/2.4.0 >> >> Thanks! >> >> — >> You are receiving this because you were mentioned. >> Reply to this email directly, view it on GitHub >> < #5 (comment) >, >> or unsubscribe >> < https://github.com/notifications/unsubscribe-auth/ANDS4FRBLNRVNHLHMYWU5ATRIIWFRANCNFSM4J4BLX4Q > >> . >> > > > -- > > George W Vandenberghe > > *IMSG* at NOAA/NWS/NCEP/EMC > > 5830 University Research Ct., Rm. 2141 <https://www.google.com/maps/search/5830+University+Research+Ct.,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> <https://www.google.com/maps/search/5830+University+Research+Ct.,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> > <https://www.google.com/maps/search/5830+University+Research+Ct.,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g>> College Park, MD 20740 <https://www.google.com/maps/search/5830+University+Research+Ct.,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> > > ***@***.*** > > 301-683-3769(work) 3017751547(cell) > > -- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 <https://www.google.com/maps/search/5830+University+Research+Ct.,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> <https://www.google.com/maps/search/5830+University+Research+Ct.,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> College Park, MD 20740 <https://www.google.com/maps/search/5830+University+Research+Ct.,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> ***@***.*** 301-683-3769(work) 3017751547(cell) — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#5 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AKWSMFEHWGEXNUFEKU7LCULRIK4DNANCNFSM4J4BLX4Q> .

GeorgeVandenberghe-NOAA · 2020-03-20T14:33:05Z

What is the exact syntax for this git from github? On Thu, Mar 19, 2020 at 9:04 PM Hang-Lei-NOAA <notifications@github.com> wrote:

…

hi George The w3emc_para/2.4 has no change in w3emc library. It just compiled with the para-netcdf. You can get the tar file from GitHub necplibs-w3emc repo. With tag2.4.0 Thanks Hang On Thu, Mar 19, 2020 at 8:45 PM GeorgeVandenberghe-NOAA < ***@***.***> wrote: > Hang. Do you have a source or git location (preferred) for w3emc_para/2.4 > so I can build it in my portable location everywhere > including orion. > > On Thu, Mar 19, 2020 at 11:02 AM George Vandenberghe - NOAA Affiliate < > ***@***.***> wrote: > > > I am having trouble getting parallel netcdf to RUN on Orion. Have not > > run it down yet. It works when the parallel API is disabled (through > > namelist) at runtime. > > > > Have asked others about their results but no response yet. > > > > I need a source for w3emc_para. > > > > > > On Thu, Mar 19, 2020 at 10:49 AM Kate Friedman < ***@***.*** > > > > wrote: > > > >> Need w3emc_para/2.4.0 library on Orion to build gfs_bufr. @Hang-Lei-NOAA > >> <https://github.com/Hang-Lei-NOAA> When will NCEPLIBS be set up on > >> Orion? Have you and others from the NCEPLIBS team get Orion accounts? > >> > >> @GeorgeVandenberghe-NOAA <https://github.com/GeorgeVandenberghe-NOAA> > >> Would you be able to add the w3emc_para/2.4.0 library to your set on > Orion > >> until the official NCEPLIBS is available? The changes for v16 also > require > >> these new libraries if you can add them too: > >> > >> - hdf5_parallel/1.10.6 > >> - netcdf_parallel/4.7.4 > >> - w3emc_para/2.4.0 > >> > >> Thanks! > >> > >> — > >> You are receiving this because you were mentioned. > >> Reply to this email directly, view it on GitHub > >> < > #5 (comment) > >, > >> or unsubscribe > >> < > https://github.com/notifications/unsubscribe-auth/ANDS4FRBLNRVNHLHMYWU5ATRIIWFRANCNFSM4J4BLX4Q > > > >> . > >> > > > > > > -- > > > > George W Vandenberghe > > > > *IMSG* at NOAA/NWS/NCEP/EMC > > > > 5830 University Research Ct., Rm. 2141 > <https://www.google.com/maps/search/5830+University+Research+Ct .,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> > > <https://www.google.com/maps/search/5830+University+Research+Ct .,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> > > > > <https://www.google.com/maps/search/5830+University+Research+Ct .,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g>> > College Park, MD 20740 > <https://www.google.com/maps/search/5830+University+Research+Ct .,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> > > > > ***@***.*** > > > > 301-683-3769(work) 3017751547(cell) > > > > > > -- > > George W Vandenberghe > > *IMSG* at NOAA/NWS/NCEP/EMC > > 5830 University Research Ct., Rm. 2141 > <https://www.google.com/maps/search/5830+University+Research+Ct .,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> > > <https://www.google.com/maps/search/5830+University+Research+Ct .,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> > College Park, MD 20740 > <https://www.google.com/maps/search/5830+University+Research+Ct .,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> > > ***@***.*** > > 301-683-3769(work) 3017751547(cell) > > — > You are receiving this because you were mentioned. > Reply to this email directly, view it on GitHub > < #5 (comment) >, > or unsubscribe > < https://github.com/notifications/unsubscribe-auth/AKWSMFEHWGEXNUFEKU7LCULRIK4DNANCNFSM4J4BLX4Q > > . > — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#5 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ANDS4FROWFG25MOQSENPW2TRIK6K3ANCNFSM4J4BLX4Q> .

-- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 George.Vandenberghe@noaa.gov 301-683-3769(work) 3017751547(cell)

Hang-Lei-NOAA · 2020-03-20T14:41:13Z

Hi, George git clone https://github.com/NOAA-EMC/NCEPLIBS-w3emc.git git tag -l git checkout w3emc_v2.4.0 you will get that tag. Thanks, Hang On Fri, Mar 20, 2020 at 10:33 AM GeorgeVandenberghe-NOAA < notifications@github.com> wrote:

…

What is the exact syntax for this git from github? On Thu, Mar 19, 2020 at 9:04 PM Hang-Lei-NOAA ***@***.***> wrote: > hi George > > The w3emc_para/2.4 has no change in w3emc library. It just compiled with > the para-netcdf. > > You can get the tar file from GitHub necplibs-w3emc repo. With tag2.4.0 > > Thanks > Hang > > On Thu, Mar 19, 2020 at 8:45 PM GeorgeVandenberghe-NOAA < > ***@***.***> wrote: > > > Hang. Do you have a source or git location (preferred) for w3emc_para/2.4 > > so I can build it in my portable location everywhere > > including orion. > > > > On Thu, Mar 19, 2020 at 11:02 AM George Vandenberghe - NOAA Affiliate < > > ***@***.***> wrote: > > > > > I am having trouble getting parallel netcdf to RUN on Orion. Have not > > > run it down yet. It works when the parallel API is disabled (through > > > namelist) at runtime. > > > > > > Have asked others about their results but no response yet. > > > > > > I need a source for w3emc_para. > > > > > > > > > On Thu, Mar 19, 2020 at 10:49 AM Kate Friedman < > ***@***.*** > > > > > > wrote: > > > > > >> Need w3emc_para/2.4.0 library on Orion to build gfs_bufr. > @Hang-Lei-NOAA > > >> <https://github.com/Hang-Lei-NOAA> When will NCEPLIBS be set up on > > >> Orion? Have you and others from the NCEPLIBS team get Orion accounts? > > >> > > >> @GeorgeVandenberghe-NOAA < https://github.com/GeorgeVandenberghe-NOAA> > > >> Would you be able to add the w3emc_para/2.4.0 library to your set on > > Orion > > >> until the official NCEPLIBS is available? The changes for v16 also > > require > > >> these new libraries if you can add them too: > > >> > > >> - hdf5_parallel/1.10.6 > > >> - netcdf_parallel/4.7.4 > > >> - w3emc_para/2.4.0 > > >> > > >> Thanks! > > >> > > >> — > > >> You are receiving this because you were mentioned. > > >> Reply to this email directly, view it on GitHub > > >> < > > > #5 (comment) > > >, > > >> or unsubscribe > > >> < > > > https://github.com/notifications/unsubscribe-auth/ANDS4FRBLNRVNHLHMYWU5ATRIIWFRANCNFSM4J4BLX4Q > > > > > >> . > > >> > > > > > > > > > -- > > > > > > George W Vandenberghe > > > > > > *IMSG* at NOAA/NWS/NCEP/EMC > > > > > > 5830 University Research Ct., Rm. 2141 > > <https://www.google.com/maps/search/5830+University+Research+Ct > .,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> > > > > <https://www.google.com/maps/search/5830+University+Research+Ct > .,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> > > > > > > > <https://www.google.com/maps/search/5830+University+Research+Ct > .,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g>> > > College Park, MD 20740 > > <https://www.google.com/maps/search/5830+University+Research+Ct > .,+Rm.+2141+%0D%0D%0A+%0D%0D%0A+College+Park,+MD+20740?entry=gmail&source=g> > > > > > > ***@***.*** > > > > > > 301-683-3769(work) 3017751547(cell) > > > > > > > > > > -- > > > > George W Vandenberghe > > > > *IMSG* at NOAA/NWS/NCEP/EMC > > > > 5830 University Research Ct., Rm. 2141 > > <https://www.google.com/maps/search/5830+University+Research+Ct > .,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> > > > > <https://www.google.com/maps/search/5830+University+Research+Ct > .,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> > > College Park, MD 20740 > > <https://www.google.com/maps/search/5830+University+Research+Ct > .,+Rm.+2141+%0D%0D%0A+%0D%0D%0ACollege+Park,+MD+20740?entry=gmail&source=g> > > > > ***@***.*** > > > > 301-683-3769(work) 3017751547(cell) > > > > — > > You are receiving this because you were mentioned. > > Reply to this email directly, view it on GitHub > > < > #5 (comment) > >, > > or unsubscribe > > < > https://github.com/notifications/unsubscribe-auth/AKWSMFEHWGEXNUFEKU7LCULRIK4DNANCNFSM4J4BLX4Q > > > > . > > > > — > You are receiving this because you were mentioned. > Reply to this email directly, view it on GitHub > < #5 (comment) >, > or unsubscribe > < https://github.com/notifications/unsubscribe-auth/ANDS4FROWFG25MOQSENPW2TRIK6K3ANCNFSM4J4BLX4Q > > . > -- George W Vandenberghe *IMSG* at NOAA/NWS/NCEP/EMC 5830 University Research Ct., Rm. 2141 College Park, MD 20740 ***@***.*** 301-683-3769(work) 3017751547(cell) — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#5 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AKWSMFBU76KLWEWJK3LTXL3RIN5DBANCNFSM4J4BLX4Q> .

KateFriedman-NOAA · 2020-04-01T16:52:39Z

Sync merged port2orion with feature/gfsv16b at 1aeda04.

…uild enkf_chgres_recenter and prelimiary updates to build enkf_chgres_recenter_nc

KateFriedman-NOAA · 2020-04-01T20:10:47Z

Need updated ProdGSI before I can build chgres_recenter_ncio code (some modules come from GSI).

Using a combination of official NCEPLIBS and George V's NCEPLIBS I was able to build:

gfs_bufr
tocsbufr
fv3nc2nemsio.x
regrid_nemsio
chgres_recenter.exe

Prior work got these to build:

fbwndgfs
gaussian_sfcanl.exe
supvit
syndat_getjtbul
syndat_maksynrc
syndat_qctropcy
tave.x
vint.x

Put in request to Hang to get other library versions installed on Orion. Will update all orion modulefiles when official NCEPLIBS is expanded.

CoryMartin-NOAA · 2020-04-02T19:48:22Z

@KateFriedman-NOAA I have ProdGSI compiled on Orion:
/work/noaa/da/Cory.R.Martin/noscrub/git/ProdGSI

branch feature/orion_crm from feature/parallel_ncio
added a new modulefile and modified build_all_cmake

I have not tested it to see if it runs, just that the executables build.

KateFriedman-NOAA · 2020-04-03T15:15:14Z

Great, thanks @CoryMartin-NOAA ! I checked out a copy of feature/orion_crm under my global-workflow port2orion branch and was able to build is successfully. I did notice a few warning messages, can you take a look at my build log?

/work/noaa/nems/kfriedma/git/port2orion/sorc/build_gsi.log

Thanks!

CoryMartin-NOAA · 2020-04-03T15:20:52Z

@KateFriedman-NOAA I don't have permission to view the file but I also saw a lot of warning messages when compiling. I think it stems from the external GSI utilities and it's complaining whenever subroutines from other modules are not explicitly in "use X, only Y" statements. I think this is an Intel 2020 thing (that's what I used because that is what Hang compiled the libraries in)

* feature/gfsv16b: modified: checkout.sh to checkout model tag GFS.v16.0.9 Issue #1: set g2o1_obtype_conus_sfc in config.metp to "ONLYSF ADPUPA" Issue #1: update sorc/checkout.sh to checkout verif_global_v1.9.0 further updated exglobal_fcst_nemsfv3gfs.sh to use restart_wave directory for gdas cycle as well modified: jobs/JGLOBAL_FORECAST parm/config/config.wave scripts/exglobal_fcst_nemsfv3gfs.sh add WW3 break-point restart capability and clean up forecast script. Conflicts: sorc/checkout.sh

* feature/gfsv16b: modified: ../Externals.cfg and checkout.sh to check out UPP tag tag upp_gfsv16_release.v1.0.10 and model tag GFS.v16.0.10 Updated the algorithm used to compute CAPE and CIN in UPP. The computation is now bounded from the surface up to 1 hPa instead of the model top to avoid producing erroneous large CAPE and CIN values. Issue #1 - add mod_icec.sh to UPP ush script symlinking in link_fv3gfs.sh

…block for CFP_MP

… build fix to it

…nd build update

KateFriedman-NOAA · 2020-08-03T14:45:11Z

Committed at 206797c: New GLDAS tag which includes Orion support. New rocoto module (rocoto/1.3.2) available on Orion which includes updates to fix UNAVAILABLE job states on SLURM machines. Updates to UFS_UTILS for Orion...will test and confirm to George Gayno in ufs-community/UFS_UTILS#26.

…ion by default

* feature/gfsv16b: Issue #1: refactor CFP in DA sections of HERA.env and WCOSS_DELL_P3.env Issue #1: add enkf member sfcf006.nc to enkf tarballs Revert "modified: config.base.emc.dyn to use obsproc_prep.iss70457.netcdfhistory_atmos" modified: config.base.emc.dyn to use obsproc_prep.iss70457.netcdfhistory_atmos

…init job settings

…sv16 branch after commit to it

KateFriedman-NOAA · 2020-10-15T19:22:33Z

Sync merged release/gfsv16.0.0 branch into port2orion. Now testing port2orion on Orion, Hera, and WCOSS-Dell for several resolution combinations before prepping to merge back to develop.

Squashed commit of the following: commit 636ded675b81b15e8b3af2a211edf44f17972cf0 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 20 19:23:16 2020 +0000 Issue #1 - add wtime_fcst_gfs time of 4hrs for C384 commit 4007f116adcde8372e590489d0faa0181babbc15 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 20 18:29:15 2020 +0000 Issue #1 - fix firstcyc queue bug in workflow_utils.py on WCOSS commit ebdb058fd138a7aa408d69c967747686ea5b77d9 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 20 13:23:05 2020 -0500 Issue #1 - resource updates from low res testing - set io_layout to "1,1" for low res gfs in config.fcst - set npe_wav[_gfs] to 140 for all resolutions, same wave grid - increase nth_fv3 to 4 for C192 and C384 - set smaller walltime for gfsfcst when resolutions less than C768 commit 3f0ab6ff2dd4ca42a45e68972b1936d398b32097 Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Tue Oct 20 17:55:18 2020 +0000 Issue #1 - increase C768 npe_eobs to 200 for Hera nodes with less memory commit d5b69c49ddbd03982db79f09707a49d01ef0b443 Merge: 4ebdd230 794e6655 Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Tue Oct 20 16:56:27 2020 +0000 Merge remote-tracking branch 'origin/release/gfsv16.0.0' into port2orion * origin/release/gfsv16.0.0: Issue #1 - pull in corrected npe_eobs values in config.resources Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support commit 4ebdd230c121a3c839829aa4ef855d80eb462549 Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Tue Oct 20 16:53:46 2020 +0000 Add UPP netcdf module library load to HERA.env to resolve runtime netcdf version mismatch commit 794e6655cb227973e47b2373d0e4c97bf297479e Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 20 16:45:58 2020 +0000 Issue #1 - pull in corrected npe_eobs values in config.resources commit 1d0cad425b1e163377bba8ace6622bbbb2d81de0 Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Mon Oct 19 19:24:55 2020 +0000 Issue #1 - add parm mon folder to ignore list and move parm section of ignore list up commit d632c87a8f2ce85d54fa45da14aa09f91a0ec680 Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Mon Oct 19 19:20:31 2020 +0000 Issue #1 - add FDATE to config.base commit 22d4118f4bc7853fa81f6505fd9aaf5bc6dab4f8 Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Mon Oct 19 19:12:29 2020 +0000 Issue #1 - save GFSv16 hand-off resource settings into new static nco configs commit 6fd73d7fdf40b291ff49193b606538b540e46139 Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Mon Oct 19 19:11:37 2020 +0000 Issue #1 - new FV3 tag that builds on Hera/Orion and update for building/running high res system on Hera commit 484550c13d8ef957478f20afd6e722f7f610bb8f Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Oct 16 15:40:35 2020 +0000 Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support commit 58dcf6d961f7478fec64a850e7bcd19ffd8f3741 Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Oct 15 15:08:38 2020 -0500 Update .gitignore for script renaming and removed external files commit e3f8df65082853baa5a22ed3b242efdae66d40ba Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Oct 15 11:59:58 2020 -0500 Add wave env updates into ORION.env, increase waveinit tasks, and update resources for analysis and efcs walltimes commit e5e7cf1ea61d99080ec95b446c1bee45a57321a3 Merge: a1a7ac94 4b2d26db Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 13 14:25:56 2020 -0500 Sync merge with release/gfsv16.0.0 branch commit 4b2d26db3b9b66ecfdd4756bfcddb6e16f255b03 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 13 17:41:24 2020 +0000 Issue #1 - adjust WAFS dependencies to wait for f036 post output commit 9ef1999270e05c1ff5bae5ea5f737d9474c98b3d Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Oct 9 19:27:09 2020 +0000 Issue #1 - adding release notes for GFSv16 commit bf21010067bf7587be93229a979da347278fd7eb Merge: d5e8be98 31563a59 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Oct 9 18:15:36 2020 +0000 Merge remote-tracking branch 'origin/feature/gfsv16b' into release/gfsv16.0.0 commit d5e8be989d1f2f45095fea17fcb5ed1385759e89 Merge: 7728ce18 561e1953 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Oct 9 18:13:53 2020 +0000 GFSv16 package changes from feature/gfsv16b before final wave updates commit 31563a5982b26d7441e2673d68d1d1dac4fe231d Merge: bf27d0b4 6edf0f7b Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 19:03:10 2020 -0400 Merge pull request #158 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen Feature/gfsv16 wave prdgen commit 6edf0f7b396587c4e014ba08fb6199461a970c41 Merge: 896ba312 bf27d0b4 Author: wx21rph <Roberto.Padilla@m71a3.ncep.noaa.gov> Date: Thu Oct 8 22:54:12 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen Generating awips files with masks and elimination wmo headers for Arctic Ocean commit 896ba31270185a1edaa3c6d32ec3c4295badf136 Author: wx21rph <Roberto.Padilla@m71a3.ncep.noaa.gov> Date: Thu Oct 8 22:50:48 2020 +0000 Issue #94 producing awips files with masks and deleting wmo headers for arctic ocean commit bf27d0b4de54e6b873e20d784012c93384ad2358 Merge: 561e1953 959dac21 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 18:23:17 2020 -0400 Merge pull request #157 from JessicaMeixner-NOAA/feature/gfsv16b-wavegrids Adding wave grids to grib interpolation commit 959dac21e98ff96130f8e8c90a4b94b18c76f4f3 Merge: 50f33dd9 561e1953 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Thu Oct 8 21:57:29 2020 +0000 Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wavegrids commit 50f33dd92e1f78f8879cb037652b1b4393511842 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Thu Oct 8 21:44:23 2020 +0000 updates to add glo_30m to the created grib files for waves for awips processing commit 561e19532e68aaff69f5b2568c3ebb2a536b7149 Merge: 7421143a 853a4619 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 16:10:32 2020 -0400 Merge pull request #156 from lgannoaa/feature/gfsv16b Modify gfs/gdas post job to 20 minutes in wall clock. commit 853a46199f2c59ff84422024b55a70e2679213ee Author: Lin.Gan <lin.gan@noaa.gov> Date: Thu Oct 8 19:55:56 2020 +0000 Modify gfs/gdas post job to 20 minutes in wall clock. commit 7421143a169264c8480aea5970a6d67f9bc56c43 Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 18:40:28 2020 +0000 Issue #1 - update link_fv3gfs.sh to point to newly frozen fix_nco_gfsv16 FIX_DIR commit 8ac89aee11e7099303600ba6df8e3d4bf4d70a66 Merge: db9fa173 eb4ad338 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 14:37:11 2020 -0400 Merge pull request #155 from lgannoaa/feature/gfsv16b Further ecflow updates commit eb4ad338dfa1f51c9ec4ada58601ffd3f6894d7f Author: Lin.Gan <lin.gan@noaa.gov> Date: Thu Oct 8 17:58:29 2020 +0000 Modify two wafs jobs trigger as: jgfs_atmos_wafs_grib2 trigger ../../post/jgfs_atmos_post_f000 == complete jgfs_atmos_wafs_grib2_0p25 trigger ../../post/jgfs_atmos_post_f036 == complete commit 589b1df4d5637f6e4521e79d4f286a463da477f3 Merge: 445a16b0 db9fa173 Author: Lin.Gan <lin.gan@noaa.gov> Date: Thu Oct 8 17:46:36 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit db9fa173028efd7ed796024a2f4753629e91922b Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 16:01:50 2020 +0000 Issue #1 - update WAFS tag to gfs_wafs.v6.0.10 and change WAFS job dependencies commit 2a0c9739631ae4b1305a2653a1783cce287aeb96 Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 15:12:10 2020 +0000 Issue #1 - update config.fv3 and config.resources with v16rt2 values commit b5fbac7affc200e2c9a420f81615d0ae80b1dacf Merge: 5dac3374 6402996f Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 10:36:43 2020 -0400 Merge pull request #154 from CoryMartin-NOAA/bugfix/eobs_resources Change config.resources for eobs for low resolution cases commit 5dac33742edd372a4e9b08c0b3029bb928cc569b Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 14:35:23 2020 +0000 Issue #1 - update gfs_util modulefiles commit 6402996f0cb5f787d04ac08efc8dd92dca767618 Author: CoryMartin-NOAA <cory.r.martin@noaa.gov> Date: Thu Oct 8 14:28:02 2020 +0000 Change config.resources for eobs for low resolution cases commit aae0912df6b1398cdad563495475916970590b1a Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 13:51:06 2020 +0000 Issue #1 - update to fbwndgfs modulefiles for WCOSS-Dell and WCOSS-Cray commit 244e91ca0caf433f82e6e709413db4bac40aade2 Merge: 3bdda7fb 3b051e93 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Oct 8 09:40:24 2020 -0400 Merge pull request #153 from JessicaMeixner-NOAA/bugfix/wavedependency update wave post pnt dependency commit 5962e117f93f1fc9f040f97b9446bcf9dc1138e1 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Thu Oct 8 11:24:41 2020 +0000 updates to parm to reduce the number of wave variables changes to the config so that wave models are interpolated to the multi_1 masked files for the regional output grids commit 445a16b030384a84c60318600a5ccdeeccbd063b Author: Lin.Gan <lin.gan@noaa.gov> Date: Thu Oct 8 04:03:32 2020 +0000 Modify module for each job to match implementation package change Modify two wafs jobs trigger Modify wall clock and resource for running jobs in NCO Modify obsproc package location commit 3b051e93adf60717f446564a08e5f3a11fd742af Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Thu Oct 8 01:10:14 2020 +0000 add a dependency for the wavepostpnt on wavepostbndpnt for just gfs as this job does not exist for gdas commit 3bdda7fb50676d25dbc03fffa739889a141b913c Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Oct 7 17:36:27 2020 +0000 Issue #1 - update WAFS tag to gfs_wafs.v6.0.9 commit 3a700dbda1d6f6ef965cf2fbf30cfdf6cb2a8fe2 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Oct 7 14:36:02 2020 +0000 Issue #1 - remove POE/BACK block from config.prep and set POE=YES/BACK=off as defaults in env/WCOSS_DELL_P3.env prep section commit 8cc7d57be3c1d08529dd37633a83a6ffa8ca94b3 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Oct 7 14:30:19 2020 +0000 Issue #1 - remove unneeded DMPDIR and ICSDIR from config.base.nco.static commit 343ea3daece25bfeb1f8e870d361a364d1c228f0 Merge: 22f2a407 b57cd17d Author: Kate Friedman <kate.friedman@noaa.gov> Date: Wed Oct 7 09:47:18 2020 -0400 Merge pull request #152 from JessicaMeixner-NOAA/feature/addwavedependency for rocoto add a dependency to wavepostpnt job on wavepostbndpnt commit b57cd17dafee5415b4955fcd8bbc76eb27e88740 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Wed Oct 7 13:19:50 2020 +0000 for rocoto add a dependency to wavepostpnt job on wavepostbndpnt so that both jobs will not run at the same time which will slow both jobs down. This is the reason for the dependency, otherwise there is not a "true" dependency between the jobs commit 22f2a407e853b7d5342ee52faa53affdb25ac44e Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 20:38:42 2020 +0000 Issue #1 - return POE=YES and BACK=off setting for prep on WCOSS_DELL_P3 commit c530316d07ae129f26907b2cae2079b55b37d0c2 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 19:32:52 2020 +0000 Issue #1 - remove hardcoded POE and BACK values from config.prep commit aece8baef1cd2f46991cb1235c315e228f7b661e Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 19:02:37 2020 +0000 Issue #1 - move ABIBF, AHIBF, and HDOB pointers into RUN_ENVIR=emc block commit c75766cd176802242f003ad3612aadff02563fb2 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 18:17:35 2020 +0000 Issue #1 - update config.fv3 based on real-time parallel commit f79ec7e0ce356213681e8c87655bb3fb66df16f1 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 17:40:16 2020 +0000 Issue #1 - update prep job resources commit 577b060e63b1f47c77fd8e7a2d1b7f111fe6fcd4 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 16:08:07 2020 +0000 Issue #1 - update g2tmpl module load in modulefiles/module_base.wcoss_dell_p3 commit c28d8cea538cdcdfc8557cb71120436edd86e313 Merge: 6197bc62 1b79fd35 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 11:16:32 2020 -0400 Merge pull request #150 from NOAA-EMC/feature/gfsv16b_updates nwtest module library and tag updates commit 1b79fd35e79fe7d0bc8eb460dfc08d44261fc470 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 14:34:26 2020 +0000 Issue #1 - config updates from real-time parallel commit 11ca41294784278dc425e1ca1320253239a85d40 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Oct 6 13:44:29 2020 +0000 Issue #1 - remove unneeded line in vrfy.sh and update link_fv3gfs.sh for UFS_UTILS execs commit 97e9d7f2d75bb7167b56aaa70c53f53e4a189192 Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Oct 5 18:50:40 2020 +0000 Issue #1 - update GSI tag to gfsda.v16.0.0 commit f6689d462ba4528c99a2a331ae8890759ba25ecb Merge: 01e36208 8048cd02 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Mon Oct 5 14:05:27 2020 -0400 Merge pull request #149 from GuangPingLou-NOAA/feature/gfsv16b Add 6 bufr stations to the bufr sounding output commit 01e362089fbf71a962fcdfc7db48f243b74e2e50 Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Oct 5 17:09:04 2020 +0000 Issue #1 - update component tags and modulefiles for nwtest lib updates, remove unneeded module load and modulefile from downstream wave job rocoto scripts commit 6197bc623013d7fca82c556f3fb51c15832578b3 Merge: 451669a8 cd86b0ed Author: Kate Friedman <kate.friedman@noaa.gov> Date: Mon Oct 5 10:47:08 2020 -0400 Merge pull request #148 from NOAA-EMC/feature/gfsv16b_updates Updates to optimize wave post jobs commit cd86b0eddd305483007e1381d0d4a7256fa05680 Merge: 9b32bf0c 95bc516a Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Oct 5 14:16:50 2020 +0000 Merge branch 'feature/gfsv16b_updates' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b_updates commit 9b32bf0c83ac9eb38f8d3b1b405b704b26c6592a Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Oct 5 14:16:21 2020 +0000 Issue #1 - adjust error handling in wave rocoto job scripts commit 8048cd0285c8b9c8606673b04d60e8a137fe89b8 Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Sat Oct 3 00:45:21 2020 +0000 issue #142 generate station i,j grid commit e4e4b84235344b6da44ae732020115581abb9afe Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Sat Oct 3 00:45:00 2020 +0000 issue #142 generate station i,j grid commit 68e5fd7279bf1f9c30fa4daa16bf44795f5e91f6 Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Sat Oct 3 00:44:46 2020 +0000 issue #142 generate station i,j grid commit fcf1f415333d53fe3a97546d4a16de55d6e1d703 Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Sat Oct 3 00:43:49 2020 +0000 issue #142 add 6 bufr station data commit 026b4e0a2ec1da85a3cc8c73053dd85fd4d56439 Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Sat Oct 3 00:42:58 2020 +0000 issue #142 add 6 bufr stations for Thailand TMD commit faaf8041faeecbc4c39cb37782bbe291ebd7a011 Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Sat Oct 3 00:41:09 2020 +0000 issue #145 change dev path to prod for parallel netcdf modules commit e6ba71f58ab5e88957f12fc742fded77a58f75d2 Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Sat Oct 3 00:40:34 2020 +0000 issue #145 change dev path to prod for parallel netcdf modules commit 95bc516af61e4aa35997f45ea625773f947c2125 Merge: 28904cdd a4d0e4d7 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Fri Oct 2 15:34:48 2020 -0400 Merge pull request #143 from JessicaMeixner-NOAA/feature/gfsv16b-wave-byhr optimize wave post and EE2 commit 451669a8f8d7778addd7bbd090d2fe71c9a6e3f8 Merge: 340f849f 28904cdd Author: Kate Friedman <kate.friedman@noaa.gov> Date: Fri Oct 2 15:32:41 2020 -0400 Merge pull request #144 from NOAA-EMC/feature/gfsv16b_updates Issue #1 - updates for modules and small fixes commit 28904cddca4d3e432f6b155ae018b6a081aea82e Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Oct 2 19:05:10 2020 +0000 Issue #1 - updates for modules and small fixes - fix to run ens_tracker without tclogg module in modulefiles/module_base.wcoss_dell_p3 - fix to sorc/syndat_qctropcy.fd/qctropcy.f for compile warning - fix to gfswaveawipsbulls dependency in setup scripts - update to bufr/11.3.0 from bufr/11.2.0 in modulefiles - add override ability for POE for prep jobs in env/WCOSS_DELL_P3.env commit a4d0e4d7a063c14f711bee5ef32cd0b183121ea7 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Oct 2 18:59:22 2020 +0000 reverting changes to configs that were not intented to be committed commit 2e6ba320b39b50030c8097a09700e2eb81cb724a Merge: cb7b27c9 340f849f Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Oct 2 18:08:59 2020 +0000 Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr commit cb7b27c96c59388e39283b2c01aff2da92fcedbf Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Oct 2 18:08:16 2020 +0000 fix resource time estimates commit d51a260adc0fb003730ae4090c528856ac18be93 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Oct 2 18:04:50 2020 +0000 bug fix in exgfs_wave_post_pnt.sh commit 340f849f1cad6b562a941f15318eaf2d050743f1 Merge: 897286fb d5457ec1 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Fri Oct 2 12:00:00 2020 -0400 Merge pull request #141 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen Updates to downstream wave jobs commit 2b2635d441beb988e6c09a329eb80e1d519266ee Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Oct 2 14:38:06 2020 +0000 update resources and trigger from 192->180 commit 56193a6bf9e8942edd54b7b7078143a3c91bc77f Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Oct 2 14:10:05 2020 +0000 last of EE2 changes commit ad5dcff885c3690f991936412453506deed543a6 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Oct 2 14:01:25 2020 +0000 updates for EE2 from waves commit d5457ec1e15e670677eea3171e68df20e4d6ca53 Merge: 4c488d30 897286fb Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Thu Oct 1 19:02:34 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen Issue #94 Adding error capture in the Jjobs commit 4c488d30947cf556d6cbf05d570fa6c41ae59ffb Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Thu Oct 1 18:45:21 2020 +0000 Issue #94 fix for failing silently commit 897286fbdfea6a8d5765f9d89ab7c586bcadb201 Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Oct 1 18:14:37 2020 +0000 Issue #1 - update WAFS tag to gfs_wafs.v6.0.8 commit e133c5d1d509781824140f5ec1d302502394dc89 Merge: a25a7dea 545742c4 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Oct 1 09:13:05 2020 -0400 Merge pull request #140 from lgannoaa/feature/gfsv16b Update ecflow scripts for GFSv16 commit 8f79b61ab8b0c7ed17b707eaae7736a3aedd33ef Merge: cc9e98a6 a25a7dea Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Wed Sep 30 16:09:27 2020 +0000 Issue #94 solving conflicts commit cc9e98a6d03fa422f5080626da02426c174e2b45 Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Wed Sep 30 15:23:29 2020 +0000 Issue #94 add native grids as default grids commit 545742c42c635d24c360a8c9b0902483cab66359 Merge: 65ba88e5 a25a7dea Author: Lin.Gan <lin.gan@noaa.gov> Date: Wed Sep 30 14:05:40 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit a25a7deac9053dbb2ce119e3754f32c2d3f225b9 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Tue Sep 29 22:46:35 2020 +0000 Issue #1: update name of ncdiag executable and source code directory to be conistent commit 2eab17ce11be26c7d113e16e3a9159e0e6395cac Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Tue Sep 29 19:05:21 2020 +0000 cleaning up the rearranged scripts commit 65ba88e5ad97a560e4b1c6dd7a3568185e5ccbd9 Author: Lin.Gan <lin.gan@noaa.gov> Date: Tue Sep 29 18:22:29 2020 +0000 Jobs were tested with PDY 20200925, code managers from post, gempak, wave, and post process certified the test run result. This merge included an update from high watermark testing (tested by gfs team using devonprod) results impact the following jobs: jgfs_atmos_analysis.ecf jgfs_forecast.ecf jgdas_atmos_analysis.ecf jgdas_enkf_update.ecf jgdas_enkf_ecen.ecf commit d86cfee7befd1d97c9ff6fd8cb58d2f9c9f9f1d8 Merge: abe24e27 69bdae3e Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Mon Sep 28 18:47:23 2020 +0000 Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr commit 121bafee1e227119ddcba233da5b59af242128e4 Merge: 0d7ba5fb 69bdae3e Author: Lin.Gan <lin.gan@noaa.gov> Date: Mon Sep 28 18:42:03 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit 95f03be594d2944f14f0f6baa600bae27691e891 Merge: 7278b067 69bdae3e Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Mon Sep 28 17:30:03 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit 69bdae3e7cdb35db28d899b7384daab48e888eb4 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Mon Sep 28 16:58:47 2020 +0000 Issue #1: update parm/config.vrfy to define VSDBJOBSH (used by jobs/rocoto/vrfy.sh) commit abe24e279666ecccb27fb875322373b4920a66d3 Merge: d4ebc2e6 ef6d2c5c Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Sep 25 21:56:05 2020 +0000 Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr Conflicts: parm/config/config.resources commit 0d7ba5fb286ac280efda5510a23e2dbf625ba19a Author: Lin.Gan <lin.gan@noaa.gov> Date: Fri Sep 25 21:34:42 2020 +0000 Code manager indicated all wafs jobs wall clock is 30 mins. Code manager indicated job card for scripts/gfs/atmos/gempak/jgfs_atmos_pgrb2_spec_gempak.ecf need to be changed commit 998228f94e36f63a0586f431fbcd32fb646d0ee6 Author: Lin.Gan <lin.gan@noaa.gov> Date: Fri Sep 25 21:02:57 2020 +0000 The EMC realtime parallel does not use operational job settings. Ecflow job card roll back the setting from module_used_gfs-16_job google sheet document. commit 0e700ef159835510b3e3d02d27448826cb8dd914 Merge: 9b8e2f3a ef6d2c5c Author: Lin.Gan <lin.gan@noaa.gov> Date: Fri Sep 25 19:49:13 2020 +0000 Bring change from upstream_feature_gfsv16b commit ef6d2c5ca3243c579615ee47bcef494bc42f335e Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Sep 25 16:17:05 2020 +0000 Update GLDAS tag to gldas_gfsv16_release.v1.10.0 commit a9f8cb2616259b5610b9d101b5f9e50ea3013a2e Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Sep 25 16:06:11 2020 +0000 Update gfswafs job to run with loop over fcsthrs commit 8187a31eca915184a43c0649db0170271b4ee6a9 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Fri Sep 25 14:06:43 2020 +0000 Issue #1: update vrfy.sh to submit vsdb processing as separate job (only on WCOSS_DELL_P3) commit 320f33033ac0f6f6919bd933c0a18d2a4088fcd6 Author: Roberto Padilla <Roberto.Padilla@noaa.gov> Date: Thu Sep 24 23:29:10 2020 +0000 Issue #94 add /fakedbn to run DBN_alerts commit 0d2c6280ac80d944ea7e9e2700430f42d24b3867 Merge: f9876550 83655eda Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Sep 24 17:17:17 2020 -0400 Merge pull request #139 from NOAA-EMC/feature/gfsv16b_jobname Update script names to match ecflow convention commit 83655eda76114414f39c5e32a61b93186b42ac3c Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Sep 24 18:30:00 2020 +0000 Update config.awips for newly named JJOB scripts commit 2f5fb01d02516a6fe72664c54cd97a5585f99a3f Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Sep 24 18:20:14 2020 +0000 Update WAFS jobs/rocoto scripts to use new JJOB names commit 9b8e2f3a2b782c9dc602c620ce7efc2f7210d6dd Author: lin.gan <lin.gan@noaa.gov> Date: Thu Sep 24 15:30:45 2020 +0000 Making J-Job naming change accourding to code manager. Remove temp files commit ff50171eea7b99c7e89b0b773824464da5fe949f Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Sep 24 14:24:23 2020 +0000 Update post.sh UPP JJOB script name to submit commit 0eb85537f30b1c89ed160374e2e7f8470d7a20d0 Author: lin.gan <lin.gan@noaa.gov> Date: Wed Sep 23 18:42:52 2020 +0000 Modify each ecflow script with old j-job name for test. Modify the following in each definition file. - ecen family require new extern from previous cycle - Job jgfs_atmos_npoess_pgrb2_0p5deg trigger changed to be (requested from code manager): 1. jgfs_atmos_post_manager:release_post180 - Job jgdas_enkf_select_obs trigger changed to be: 1. previous cycle enkf post complete 2. current cycle jgdas_atmos_analysis_calc complete (new job) Tested as of 9/21/2020 before production switch with following condition: 1. Known issue in wafs gcip. Job failed. Waiting for code manager to fix. 2. obsproc testing still on going. 3. Code manager still updating j-job and ex-script names. Testing in hold until package is ready and WCOSS availability. commit 9fb09168c9aa2057a0c919f66bdf43b8e4e3a545 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 23 15:41:20 2020 +0000 Update config.base.nco.static with config.base.emc.dyn changes commit a1a7ac9495446976b9e9ccae48a39bb4b868c19b Merge: ee4bc2b7 70f5064e Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 23 10:19:52 2020 -0500 Issue #5 - sync merge with feature/gfsv16b_jobname commit 70f5064e8e345e073d9c0dc7da812d0a2a51d91d Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 23 14:00:07 2020 +0000 Script name updates for sfc_prep and tracker commit 4346c03a1aaf1cf1429a59b6a5682065c2c6e51b Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 23 13:51:44 2020 +0000 Name change for tropcy scripts and update WAFS tag commit 0ef9e49d9752643fa3ebdc8fc0ef9768968836d2 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Sep 22 17:50:35 2020 +0000 Fixing spelling mistake in config.gldas commit 9fdb9eef052586c36abf034cd335ec649bf9cf19 Merge: 869dfa35 f9876550 Author: lin.gan <lin.gan@noaa.gov> Date: Tue Sep 22 17:13:20 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit 4b1affe520e0610c14168ccba4ef3439a3b7a966 Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov> Date: Tue Sep 22 16:39:39 2020 +0000 Updated drivers and release notes commit 2ed155ccee58d3cc72d7fdf6577806c7a14e58e9 Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov> Date: Tue Sep 22 15:55:01 2020 +0000 Updated scripts commit 6d171bc82f2c63f146fe1cf760c350b2effc20e6 Author: Wen Meng <wen.meng@noaa.gov> Date: Tue Sep 22 15:26:37 2020 +0000 Update Externals.cfg with new UPP tag upp_gfsv16_release.v1.0.16. commit 4b4069b715c9ebcc5122b79a1508f70ad7c78b46 Author: Wen Meng <wen.meng@noaa.gov> Date: Tue Sep 22 14:59:24 2020 +0000 1)Update sorc/checkout.sh with new UPP tag upp_gfsv16_release.v1.0.16. 2)Update sorc/link_fv3gfs.sh with new file name convention for jjob and ex-script of post processing part. commit c071ac0159cce98ea98ce5fa8dc5337b284ad136 Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov> Date: Tue Sep 22 14:48:45 2020 +0000 Updated jobs name commit ea13d0c9146457aadd65d567fda794beeeef6c7d Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Sep 22 14:27:47 2020 +0000 Update EMC_verif-global tag to verif_global_v1.11.0 commit 92e69985706cf62cdd7b383fd45c4cd50f937053 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Sep 22 14:15:24 2020 +0000 Rename scripts to match ecf script naming convention. Add SENDDBN and DBNROOT. Update GLDAS tag. commit 37ae040a0f21ec344228128e3e79910059c3b734 Author: fanglin.yang <fanglin.yang@noaa.gov> Date: Tue Sep 22 04:30:58 2020 +0000 In anticipating changes from the GLDAS repo : renaming JGDAS_GLDAS to JGDAS_ATMOS_GLDAS, and exgdas_gldas.sh to exgdas_atmos_gldas.sh modified: driver/gdas/test_gdas_gldas.sh jobs/rocoto/gldas.sh parm/config/config.gldas sorc/link_fv3gfs.sh commit c58b93a61f77d65f042f8226445163029ebd9f8d Author: fanglin.yang <fanglin.yang@noaa.gov> Date: Tue Sep 22 04:06:06 2020 +0000 renamed: jobs/JGFS_POSTSND -> jobs/JGFS_ATMOS_POSTSND renamed: scripts/exgfs_postsnd.sh -> scripts/exgfs_atmos_postsnd.sh modified: docs/archive/README_bufr driver/product/run_postsnd.sh driver/product/run_postsnd.sh.cray driver/product/run_postsnd.sh.dell driver/product/run_postsnd.sh.hera driver/product/run_postsnd.sh.jet parm/config/config.postsnd commit bec1b83027e162e4c083464d2cdb3fbdbd5168e8 Author: fanglin.yang <fanglin.yang@noaa.gov> Date: Tue Sep 22 03:51:02 2020 +0000 renamed: scripts/exglobal_fcst_nemsfv3gfs.sh -> scripts/exglobal_forecast.sh and modified jobs/JGLOBAL_FORECAST parm/config/config.fcst commit d4ebc2e6798d13af1ced8a51899e80e209a13c71 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Mon Sep 21 18:28:15 2020 +0000 updates for optimizing point jobs commit 7278b0677be6168a9695fca6c2e08154d9af0f63 Merge: 928e3e4b f9876550 Author: Guang Ping Lou <guang.ping.lou@noaa.gov> Date: Fri Sep 18 18:35:06 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit f98765509cc7fc0e7b8979abfc73dbc5db035825 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Sep 18 16:58:57 2020 +0000 Issue #1 - update SEND variables and add DBNROOT to base configs and add check to build_enkf_chgres_recenter_nc.sh for GSI build commit e9e8d63db112ab8f5e15de08a1714cfebd386a2a Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Sep 18 15:18:48 2020 +0000 Issue #1 - update to UFS_UTILS ops-gfsv16.0.0 tag commit 3df7625d74012552cf69fcfe7c0b5384b860c999 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Sep 18 13:25:00 2020 +0000 Issue #1 - fix to link_fv3gfs.sh for new GLDAS tag commit 928e3e4b53e969f8ecdd3544c3bf2668b57c66b3 Merge: dd081426 1fc7bde9 Author: Guang Ping Lou <guang.ping.lou@noaa.gov> Date: Thu Sep 17 20:00:17 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit dd08142664e5695e3f27890c0560f0b5e48841a8 Author: Guang Ping Lou <guang.ping.lou@noaa.gov> Date: Thu Sep 17 19:57:20 2020 +0000 Issue #131 Unify dbn_alert path commit 1fc7bde9b7f99da7d0430387ec4a547e73ea641b Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Thu Sep 17 19:37:41 2020 +0000 Issue #1: update to UPP tag "upp_gfsv16_release.v1.0.15" commit 9eae5a8af39c4a8c5d47c16725ccc62b5d3c60cf Merge: ce1c7825 99c15099 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Thu Sep 17 13:46:58 2020 -0400 Merge pull request #135 from KateFriedman-NOAA/feature/gfsv16b-down Small updates to downstream jobs and tag updates commit 99c1509923399845ba794cb8fad981d12935dd03 Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Sep 17 13:13:14 2020 +0000 Fix for running prep on Hera commit 869dfa350a013f66e5fdca66aa9b1f0192c1570c Author: lin.gan <lin.gan@noaa.gov> Date: Wed Sep 16 21:25:10 2020 +0000 ecflow full day cycle included commit 515eeb5c6b188e873b304619c40c9a6efcfd9046 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 16 19:53:26 2020 +0000 Update WAFS tag to gfs_wafs.v6.0.6 commit 89f138af89814c865331b9aefcb8450b5915d1f7 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 16 16:33:21 2020 +0000 Small updates: - new UPP tag - new GLDAS tag - new WAFS tag - new module for WAFS - EE2 updates to awips scripts - added WAFS to archival - break downstream and WAFS archival into separate gfs_downstream tarball - update gfsarch dependencies to wait for all wavepost jobs to complete commit 9930e8770a2940c46e22b243c11d2ac14f95611a Merge: b3433d59 ce1c7825 Author: lin.gan <lin.gan@noaa.gov> Date: Wed Sep 16 13:25:36 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit b100c22b5bfcf455ff3ff15bd71f0ddc15f1d071 Author: Guang Ping Lou <guang.ping.lou@noaa.gov> Date: Tue Sep 15 18:57:21 2020 +0000 Issue #131 reduce scripts output to logfile commit 6866e6cd2ef1e76dd58de27ebb7d68b2bd3fa304 Author: Guang Ping Lou <guang.ping.lou@noaa.gov> Date: Tue Sep 15 18:55:03 2020 +0000 Issue #131 added a path to DBNROOT commit b3433d59d1d5b75f015b0e044a8b4e03d55407f7 Author: Lin.Gan <lin.gan@noaa.gov> Date: Tue Sep 15 17:59:32 2020 +0000 Adding wafs wave and downstream jobs commit 4c7ccd466bc71b3e73194ffc48385225e01e7c0c Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Tue Sep 15 15:29:44 2020 +0000 updates for by hour post commit ce1c78255f4bf8f40c2f116547062c7f1b3832c5 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Tue Sep 15 10:25:37 2020 +0000 Issue #1: add fhrgrp and fhrlst back to gfsawips in setup_workflow.py (bugfix) commit 67b33dd15633345e0fd59dd37728c26b36d4c0b3 Merge: c33869da 586fe6ce Author: Kate Friedman <kate.friedman@noaa.gov> Date: Mon Sep 14 10:34:39 2020 -0400 Merge pull request #130 from JessicaMeixner-NOAA/bugfix/rtofs Bugfix for rtofs commit 586fe6ce19c5fc281dec16be3347d0311f3e99ce Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Mon Sep 14 14:29:01 2020 +0000 adding the line to go back a day for RTOFS for the if not NCO section because RTOFS will not be available until 06 cycle commit 15fcb8a46e2cbc93282d1ad038e6decc5fcdacfb Author: Lin.Gan <lin.gan@noaa.gov> Date: Mon Sep 14 13:30:24 2020 +0000 Restructured ecflow - up to post step commit c33869dab2704396ea6e569dcd202a2b9866827a Author: fanglin.yang <fanglin.yang@noaa.gov> Date: Mon Sep 14 02:34:08 2020 +0000 deleted relocate_mv_nvortex.fd since storm relocation is no longer needed. modified build_tropcy_NEMS.sh to remove references to relocate_mv_nvortex commit 4320bf9fd55757df79b63ed15c2041b1acd0e604 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Sat Sep 12 00:05:38 2020 +0000 Issue #1: correct DA typos in sorc/link_fv3gfs.sh commit 674cd841a7be3a2a9c772cd455ab980195ea9fcc Merge: 46c2404e ad1a9d90 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Fri Sep 11 15:06:36 2020 -0400 Merge pull request #124 from JessicaMeixner-NOAA/feature/gfsv16b-wave Splitting post jobs for waves commit ad1a9d9044e89b75ec82bb201e35005552d3d177 Merge: 986f8f0b fd687727 Author: Jessica Meixner <jessica.meixner@noaa.gov> Date: Fri Sep 11 14:01:35 2020 -0400 Merge pull request #4 from KateFriedman-NOAA/feature/gfsv16b-splitwavepost Sync with feature/gfsv16b and small updates to split wave post changes commit fd687727b2df80f81fabc41b94f808b74e68783c Merge: 986f8f0b fc60e895 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Sep 11 17:52:30 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b-wave' into feature/gfsv16b-splitwavepost commit fc60e895dea1c123a4b8e02b50df0d0cfa43f77f Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Sep 11 17:45:03 2020 +0000 Increase walltime for new wavepost jobs commit e0dd1097de2c335400a546137569886a838c46ba Merge: 0844b004 46c2404e Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Sep 11 14:20:15 2020 +0000 Merge branch 'feature/gfsv16b' into feature/gfsv16b-wave commit 46c2404eba485d08e381ef81ebd5ac10c5ad605f Merge: c5546570 9d9b79c9 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Fri Sep 11 10:15:49 2020 -0400 Merge pull request #128 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen Feature/gfsv16 wave prdgen commit c554657023d82ac934b481593e55406c45157932 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Fri Sep 11 13:59:51 2020 +0000 Issue #1: update name of DA jobs and scripts in accordance with WCOSS Implementation Standards commit 9d9b79c911add71065b0999821772d026609ad62 Merge: cb78f7b8 d3946f90 Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Fri Sep 11 13:48:19 2020 +0000 Issue #94 solving a conflict commit cb78f7b839a7b5fd5082f39592e3b450ce059e82 Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Fri Sep 11 13:21:41 2020 +0000 Issue #94 add waves-prdgen, ICE->ICEC, Sleep in gempak script commit b4a99e3d8b2f6a3837084ddfb08da6a667de81e0 Merge: edb91373 e6148566 Author: Lin.Gan <lin.gan@noaa.gov> Date: Fri Sep 11 13:19:13 2020 +0000 Merge branch 'feature/gfsv16b' of https://github.com/lgannoaa/global-workflow into feature/gfsv16b commit e614856610da39345976823d29bdc32781f38c71 Author: lin.gan <lin.gan@noaa.gov> Date: Thu Sep 10 16:26:11 2020 +0000 add gfs gempak downstream jobs into def file commit 907291d81c512968817241b883a0084b8506f2b2 Merge: 3f9695b4 d3946f90 Author: lin.gan <lin.gan@noaa.gov> Date: Thu Sep 10 15:46:45 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit ee4bc2b7268bf8f23ca7f7b3b631ddd6730c6a8c Merge: 41d146fc d3946f90 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 9 08:54:17 2020 -0500 Issue #5 - sync merge with feature/gfsv16b commit 6b38e648f244afbba9590ea1a4de70d4ce2ed119 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Tue Sep 8 22:14:13 2020 +0000 worked on wcoss commit edb913733023b1025786901aee895d2dbca5edc7 Author: Lin.Gan <lin.gan@noaa.gov> Date: Tue Sep 8 16:09:07 2020 +0000 ecflow script rename after redesign approved - not including all wave jobs commit d3946f9006f433e0a6b2f459aeaa7fd8bf800aff Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Tue Sep 8 14:46:39 2020 +0000 Issue #1: clean up DA sections of link_fv3gfs.sh commit 986f8f0b9858f61d32d337a67efa966a7948aa94 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Sep 4 15:42:25 2020 +0000 fix from Bhavani for having first wave grib file be set as a forecast instead of analysis commit 0844b0043c937925c5ad76b4fad03308483d49b3 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Sep 4 15:42:25 2020 +0000 fix from Bhavani for having first wave grib file be set as a forecast instead of analysis commit c1d5c45c13b46964d9d2479962b8c56307a6ad11 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Fri Sep 4 15:42:25 2020 +0000 fix from Bhavani for having first wave grib file be set as a forecast instead of analysis commit 3f9695b44deef4790ae443f4d0c1844b1385374d Author: Lin.Gan <lin.gan@noaa.gov> Date: Thu Sep 3 19:07:35 2020 +0000 ecflow gfs v16 nco review 3 commit 256885283bb42c2309e820ca53b44042b8223617 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Thu Sep 3 17:44:47 2020 +0000 updates to split boundary points plus saving config file updates commit 8a203e5d5afa92a2b925f69efa5237a2c0d3dca6 Merge: 40c689b5 26c84b3c Author: Lin.Gan <lin.gan@noaa.gov> Date: Thu Sep 3 17:36:19 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b commit 64409b1e9e976b75afd8a3548e7023dce534c4ae Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Sep 3 15:42:23 2020 +0000 Adding missing space to if-block in env files to resolve runtime failure commit 0485442f5876b82de73c47429d3a70f58f0aa263 Merge: 26c84b3c 2006bbcb Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Sep 3 15:37:50 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b-wave' into feature/gfsv16b-wave * upstream/feature/gfsv16b-wave: adding pnt jobs as seperate jobs for env moving definitions of wavempexec and wave_mpmd from jobs to env lowering the resource requirement for wave prep job update module for cdo updates to resources for wave jobs Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py cleaning up wave point post scripts rename wave post script remove gridded so can rename updates to boundary point Remove extra space from line Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes fix typos updating WCOSS work around for CDO, CDO_ROOT is missing from module file adding module use for cdo module on wcoss dell updates for new weights file and adding cdo module for wave prep Adding new wavepostbndpnt and wavepostpnt jobs updating wave post scripts for restructured format updates to JJOBs for wave post point for new structure changing exit 0 to exit number for FATAL errors in ice prep for waves updating error message and exit if there is no current input file update WAVE_PREP so that currents do not check for previous 24 hour so that parallels will be reproducible also deleted unused variable renaming wave job and scripts update jobs for waves Issue #94 - pull in two fixes for wave job setup in free-forecast mode updates for wave scripts to split them, also added updates from GEFS branch to add extra error checking updates from gefs post workflow: updates for re-run case as well as extra error messages commit 26c84b3ca81dec965ab31d00409b537f61174dc1 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Thu Sep 3 14:06:29 2020 +0000 Issue #1: remove pgrb2b.0p25 dependency from gfsawips in setup_workflow.py commit 40c689b5d5886d9a4bed92e0c6262bfc5988836d Author: Lin.Gan <lin.gan@noaa.gov> Date: Thu Sep 3 02:00:09 2020 +0000 ecflow gfsv16 redesign 2 commit 609e157c2477b662b55bbf3d53999cdd30856bc8 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 2 20:35:28 2020 +0000 Issue #1 - update WAFS tag to gfs_wafs.v6.0.4 and remove HOURLY variable from WAFS configs commit b0bebad6258bd81c0b0c89b559a04d9b059c838e Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 2 20:08:01 2020 +0000 Issue #1 - change wavegempak and waveawipsgridded dependency to match waveawipsbulls and start when wavepostsbs is complete commit 084c89e3d562f8c9977eaa17624646be388f7854 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Wed Sep 2 19:58:37 2020 +0000 Issue #1: set n_sponge=42 in gfs section of config.fcst commit 2006bbcb1e54e3cd5ae0ff2826b6d0b211c1d013 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Wed Sep 2 19:22:38 2020 +0000 adding pnt jobs as seperate jobs for env commit c61cd59488b64ead77e13b2eb5faeb383d052ea0 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Wed Sep 2 19:02:21 2020 +0000 moving definitions of wavempexec and wave_mpmd from jobs to env commit 68ed2d670ebe25713554f2165a0bbc7c35fb5030 Merge: 4e7975d2 70abda26 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Wed Sep 2 17:45:26 2020 +0000 Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave Conflicts: parm/config/config.resources ush/rocoto/setup_workflow.py ush/rocoto/setup_workflow_fcstonly.py commit 70abda260dc9ab47533d25cd570dd055c4644123 Merge: 0a31d568 52e987ac Author: Kate Friedman <kate.friedman@noaa.gov> Date: Wed Sep 2 10:28:22 2020 -0400 Merge pull request #122 from KateFriedman-NOAA/feature/gfsv16b_wavedown Add downstream wave jobs to GFSv16 commit 0a31d568bdacd0fb2d8bc6e1fddb09d2c72d014c Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 2 14:09:57 2020 +0000 Remove unneeded settings from config.post commit 52e987ac67477932e5b034321cf52f1cc756081c Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 2 13:05:42 2020 +0000 Added null DBNROOT to wave awips configs commit b3c7b7379a6ebb53b4d4533b894b1bf36df3c2fd Merge: 074f2782 add6ea0b Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Sep 2 13:02:41 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b_wavedown commit 806a57838b2a6fd8a9df993fd6cd8debf9fb659a Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Wed Sep 2 12:28:43 2020 +0000 add extra script for by hour points for waves commit ab3e0b196bbb147da99da4ef34710e8d5fbb68ea Merge: 054f8c53 4e7975d2 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Wed Sep 2 11:40:04 2020 +0000 Merge branch 'feature/gfsv16b-wave' of github.com:JessicaMeixner-NOAA/global-workflow into feature/gfsv16b-wave commit 054f8c53608689b00b32d035ce728ed3d8cb3ad9 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Wed Sep 2 11:39:28 2020 +0000 updates for boundary points by hour parallelization commit 4e7975d265857e4e634e0c7352f6ed2de1a99336 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Tue Sep 1 22:45:05 2020 +0000 lowering the resource requirement for wave prep job commit add6ea0bae2c56bba2e3d76460771095b98786b1 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Tue Sep 1 19:40:10 2020 +0000 Issue #1: rename enkf_chgres_recenter executables in accordance with WCOSS Implementation Standards commit 8a7e8d9944b8727da91bfb28bbfe44958f0aeb65 Merge: 4c9978a8 595edcfa Author: Kate Friedman <kate.friedman@noaa.gov> Date: Tue Sep 1 15:00:08 2020 -0400 Merge pull request #121 from KateFriedman-NOAA/feature/gfsv16b-wafs Adding WAFS jobs to GFSv16 commit 4c9978a8b0a98527d7c78a3da0a0a55e39cefed0 Author: fanglin.yang <fanglin.yang@noaa.gov> Date: Tue Sep 1 18:48:44 2020 +0000 modified: checkout.sh to use gldas_gfsv16_release.v1.6.0 commit 595edcfaaf1372889c8d569e01ec4dfefb51c469 Merge: 8a593c8d 06bda7de Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Sep 1 17:30:08 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs commit ada0fb3155a57bdba074c84e1ab3d73eabb0e2f4 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Tue Sep 1 17:18:27 2020 +0000 update module for cdo commit 074f2782438471740453e356b856a4756e59c858 Merge: a1a3d69b 8a593c8d Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Sep 1 14:30:56 2020 +0000 Sync with WAFS branch commit a1a3d69ba40564f550053b99b4328ba41c7cc45d Merge: 249b6ef7 06bda7de Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Sep 1 14:22:20 2020 +0000 Sync merge with feature/gfsv16b commit 8a593c8df03d8a879c5488fbd671fef94f5d867d Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Sep 1 14:09:49 2020 +0000 Update to WAFS tag and added SENDDBN_NTC to both base configs commit 5270ed831c0b3c428736cbd8a789a4d3cfdcc0fe Merge: 95ec3329 eabda84f Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Sep 1 14:03:53 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs commit 06bda7dec74831951034b72c83abbb2d994ee539 Author: fanglin.yang <fanglin.yang@noaa.gov> Date: Tue Sep 1 14:02:44 2020 +0000 modified: link_fv3gfs.sh to not link or copy 0readme fix_chem fix_fv3 fix_sfc_climo which are not used by GFS.v16 and are of large size commit eabda84f97c11251f672d95bb604ad0c50e8da18 Author: fanglin.yang <fanglin.yang@noaa.gov> Date: Tue Sep 1 13:48:11 2020 +0000 modified: link_fv3gfs.sh to remove chgres_cube.fd and chgres_cube.fd in sorc/link_fv3gfs.sh commit 223492bf6c56c0491c0034dc1d4a0a3e6e97a607 Author: fanglin.yang <fanglin.yang@noaa.gov> Date: Tue Sep 1 03:59:53 2020 +0000 modified: link_fv3gfs.sh to allow "fix" directories to be removed before rerunning link_fv3gfs.sh for RUN_ENVIR=nco case commit 95ec3329e72a54b0dabdccdecd467972c4914dcd Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Aug 31 18:57:32 2020 +0000 Added WAFS jobs to free-forecast mode, updates for extending WAFS to fh120, and two bug fixes in link_fv3gfs.sh and hpssarch_gen.sh commit 6f660d9a9a5758f3d74f87f170a95a26ca0c0e6a Merge: 8da41916 3282a899 Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Aug 31 17:58:55 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs commit 3282a8996ab0510699932a53897b87730b2cc492 Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Aug 31 17:47:37 2020 +0000 Renamed global-workflow-owned ex-scripts to remove ecf extension and updated other scripts which call those ex-scripts commit 9cde3a41f34d0c2618e8fb06ff1276cec5378ef5 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 28 18:46:57 2020 +0000 Remove UFS_UTILS ecf extensions commit f7a92dbc1c3ad822d3b8e567967e91384631288d Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Fri Aug 28 18:09:26 2020 +0000 Issue #1: (1) update earc.sh directory removal to be consistent with arch.sh, (2) update config files to be consistent with EMC real-time GFS v16 parallel commit 249b6ef761fb41b5d102b282fccedeb827192dff Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 28 16:52:54 2020 +0000 Remove ecf script name extensions from downstream wave scripts commit 004a29f39204314159d2cbd028950cfaba07cf33 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 28 16:50:03 2020 +0000 Add new downstream wave jobs to workflow commit 8da4191644ff55f46e8f394e4e1d29641d3c117c Merge: 8f97726a 6319bda4 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 28 16:42:11 2020 +0000 Sync merge with feature/gfsv16b commit 8f97726a4170d56dcaf6732ae141fae9aaebfd8d Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 28 16:39:50 2020 +0000 Add new downstream WAFS jobs commit 6319bda47548873acb8859d9a47d2ac6a6ef4c67 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 28 15:41:55 2020 +0000 Issue #1 - update GLDAS and UPP workflow files for removal of ecf script extension commit 8f7615c76f76611d748246a80d9286de7c4d3295 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Thu Aug 27 20:53:25 2020 +0000 Issue #1: remove ".ecf" suffix from DA scripts referenced in sorc/link_fv3gfs.sh commit af754d1fa0aa4a521fcd5b4fc04eaa88d475dbff Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Thu Aug 27 20:47:14 2020 +0000 Issue #1: remove ".ecf" extension from DA exscripts (as per WCOSS Implementation Standards) referenced from parm/config files commit a6e91b48b7024c83491fd1f93c6d7df8e3301af5 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Thu Aug 27 20:25:45 2020 +0000 updates to resources for wave jobs commit f0b9a98973b7983eadab51c7009723b5d0b4a564 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Wed Aug 26 23:04:02 2020 +0000 Issue #1: update name of DA enkf chgres script in config.echgres commit 01f33c498bf0b5c0d48486cd04dab9c93c721906 Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Wed Aug 26 20:58:29 2020 +0000 Issue #1: Rename DA enkf chgres job and script as per EE2 guidance commit 7d3f37819aba17dc794d10f7453061802779b435 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Aug 26 18:35:59 2020 +0000 Workflow changes for wave gempak and awips downstream jobs commit 485632eafe37c1866011af1bd0a601fb1c7adc4c Merge: 2946baad e191fd4b Author: Jessica Meixner <jessica.meixner@noaa.gov> Date: Wed Aug 26 11:49:40 2020 -0400 Merge pull request #3 from KateFriedman-NOAA/feature/gfsv16b-wave Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py commit e191fd4bb87af787feab486bf072fe4dce7f12f4 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Aug 26 15:47:49 2020 +0000 Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py commit 4641a72e1ced493c7ec5d837a3093908e388b5df Merge: a1b08c92 25ae4899 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Wed Aug 26 11:33:23 2020 -0400 Merge pull request #119 from GeorgeGayno-NOAA/feature/gfsv16b enkf_chgres_recenter_nc.fd - Remove hard-coded vertical levels. commit 25ae4899cee3dc3aeff1e36f0ac1d0b0773ca2f9 Author: George Gayno <George.Gayno@noaa.gov> Date: Wed Aug 26 14:25:36 2020 +0000 feature/gfsv16b: Add Cory's updates to build 'enkf_chgres_recenter_nc' on Cray. Issue #102. commit 2946baad88d908b32793f542cab42f0c89adf009 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Wed Aug 26 13:44:06 2020 +0000 cleaning up wave point post scripts commit 3590e9a45e2b13b22ff3c3d4827907ddcf55eebf Merge: 727c3ffd a1b08c92 Author: George Gayno <George.Gayno@noaa.gov> Date: Tue Aug 25 20:20:17 2020 +0000 feature/gfsv16b: Merge updates from authoratative feature/gfsv16b branch. Issue #112. commit a1b08c92892278453f25c2530f8b8fb968af9a34 Merge: 45ad029b ce3816d3 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Tue Aug 25 16:01:57 2020 -0400 Merge pull request #116 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen Feature/gfsv16 wave prdgen commit ce3816d3e88b8d2de7472a214e66cb54aceca9a6 Merge: b0c91610 45ad029b Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov> Date: Tue Aug 25 19:55:53 2020 +0000 Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen Issue #94 Adding prdgen for waves commit 90181842fbb7a22479f12d3a67bcdc8fa4b8f669 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Tue Aug 25 19:02:22 2020 +0000 rename wave post script commit 1f15be0a8207d3117200bcc145a5ae66b7445ec3 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Tue Aug 25 19:01:41 2020 +0000 remove gridded so can rename commit 1fc5b368fe0cd438e2202b62de7753b7efed7af6 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Tue Aug 25 19:00:20 2020 +0000 updates to boundary point commit f0e3ae5c2cd441673a4a670618e87f050a12c9e9 Merge: 98d6c163 b74b21e7 Author: Jessica Meixner <jessica.meixner@noaa.gov> Date: Tue Aug 25 14:15:57 2020 -0400 Merge pull request #2 from KateFriedman-NOAA/feature/gfsv16b-wave Feature/gfsv16b wave commit b74b21e71edbb62207ccfcafe4c6ed5b6d301cfe Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Aug 25 18:14:15 2020 +0000 Remove extra space from line commit 25e2cc4596213b39d2a3dc3ee8afda4a86e10d38 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Aug 25 18:12:04 2020 +0000 Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes commit 45ad029bad4367961e5eff987f27226b0ac78d5a Author: russ.treadon <Russ.Treadon@noaa.gov> Date: Tue Aug 25 13:40:45 2020 +0000 Issue #1: several minor changes * Externals.cfg and sorc/checkout.sh: update to tag verif_global_v1.10.1 * jobs/rocoto/arch.sh: update ARCDIR cp to use new path to tracker output * scripts/run_gfsmos_master.sh.dell: remove module purge from mos driver script commit 0a85a36ef0784bebf96d2f97c24dd4c642ac23f1 Merge: d5861551 5190efb1 Author: Kate Friedman <kate.friedman@noaa.gov> Date: Tue Aug 25 09:20:42 2020 -0400 Merge pull request #118 from GuangPingLou-NOAA/feature/gfsv16b Issue #117 Modufy Bufr station Hilo's grid point representation commit 5190efb119c6eec6a7c67d90327dee4666307541 Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov> Date: Tue Aug 25 12:30:45 2020 +0000 Issue #117 Modufy Bufr station Hilo's grid point representation commit 98d6c16336e5b0a3241174c54b7631667a4f919d Merge: 0eacf5e2 32bd57ef Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Mon Aug 24 22:27:39 2020 +0000 Merge branch 'feature/gfsv16b-wave' of github.com:JessicaMeixner-NOAA/global-workflow into feature/gfsv16b-wave commit 0eacf5e21c3149d2d922b4c2495e48fb2355e639 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Mon Aug 24 22:27:28 2020 +0000 fix typos commit b0c9161061302ccf4b890cceabe5b4eaecb67e61 Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov> Date: Mon Aug 24 22:25:05 2020 +0000 Issue #94 changing native by interpolated grids for gempak commit 8a68d3c6d6996f389609d5961f32f0db116797d1 Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov> Date: Mon Aug 24 21:47:44 2020 +0000 Issue #94 removing the load of modulefiles and sending set.pdy to j-jobs commit 32bd57ef2b390dbe73a744188a40ca4c42c306fe Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Mon Aug 24 20:35:39 2020 +0000 updating WCOSS work around for CDO, CDO_ROOT is missing from module file commit a2d06bb0bf82ee48899cb26ea9abf2331b543107 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Mon Aug 24 18:55:02 2020 +0000 adding module use for cdo module on wcoss dell commit e5c9f037bd82ed4bc72cf11241d7c053160ff5b9 Author: jessica.meixner <Jessica.Meixner@noaa.gov> Date: Mon Aug 24 18:29:36 2020 +0000 updates for new weights file and adding cdo module for wave prep commit 96655fbe5b5daf130d4a9a458ce47059c047376a Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov> Date: Mon Aug 24 16:56:37 2020 +0000 Issue #94 removing modulefiles load from j-jobs commit 7f9344f777075ce3220d9a9fccba74c07e4f40e2 Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov> Date: Mon Aug 24 14:32:26 2020 +0000 Issue #94 Solving reviewers comments commit c9598a3207bb06cbd7d2619d97f723f6511da9a4 Merge: bf97710b 92a2a43d Author: Jessica Meixner <jessica.meixner@noaa.gov> Date: Mon Aug 24 10:12:43 2020 -0400 Merge pull request #1 from KateFriedman-NOAA/feature/gfsv16b-wave Adding new wavepostbndpnt and wavepostpnt jobs commit 92a2a43db190982944b4166b929a791a1b0b0750 Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Aug 24 14:06:23 2020 +0000 Adding new wavepostbndpnt and wavepostpnt jobs commit bf97710bece30195679740b0de2b32e0adc6c3c6 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Fri Aug 21 00:20:56 2020 +0000 updating wave post scripts for restructured format commit a914521cec478667191b365e2a2a62e3553e0ff7 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Thu Aug 20 23:52:47 2020 +0000 updates to JJOBs for wave post point for new structure commit 1f195f8d432072f4e4f66406ea6b09256a185d2b Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Thu Aug 20 15:20:28 2020 +0000 changing exit 0 to exit number for FATAL errors in ice prep for waves commit f836a7869dbb88badd93fcd9d08314284eee4f96 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Thu Aug 20 15:17:28 2020 +0000 updating error message and exit if there is no current input file commit 529cc3692f4fc003295584e761279be3c9405b68 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Thu Aug 20 14:50:50 2020 +0000 update WAVE_PREP so that currents do not check for previous 24 hour so that parallels will be reproducible also deleted unused variable commit 57c4258ba73778fe95118ebfae98c4bbf012ae37 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Thu Aug 20 14:09:22 2020 +0000 renaming wave job and scripts commit 1626cb2f90bfea5663f198cfc2ac2916a9200e1a Merge: da292216 d5861551 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Thu Aug 20 14:02:54 2020 +0000 Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-splitwavepost commit da2922163922f4b4b14dba78dba36e9eced3a2c5 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Thu Aug 20 13:50:15 2020 +0000 update jobs for waves commit a1c456f267ddf701aa47ad33fd231a2f1ae0bf99 Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Wed Aug 19 20:09:47 2020 +0000 Issue #94 renaming the J-jobs commit 41d146fc0fda97a41ef829ecff41b005bbf21740 Merge: c2a4f04e d5861551 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Aug 19 13:54:13 2020 -0500 Issue #5 - sync merge with feature/gfsv16b after COMPONENT update commit 036617c8a9b5da765b82c276f7b087aa4e16d679 Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Wed Aug 19 14:24:01 2020 +0000 Issue #94 Updating the modulefiles for waves-prdgen commit d5861551ae5b1fe2c2b00802159a42f7fde06357 Merge: 9b923ac3 0e0699aa Author: Kate Friedman <kate.friedman@noaa.gov> Date: Wed Aug 19 09:49:08 2020 -0400 Merge pull request #109 from NOAA-EMC/feature/gfsv16b-restructure GFSv16 restructure for new $COMPONENT subfolder commit 1e76093c8554c3ccb87a7ed243f738f5763ca5da Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Wed Aug 19 13:47:44 2020 +0000 Issue #94 adding waves-prdgen to gfsv16 commit 0e0699aac7cb00988c999546dcdf3a52b11706e3 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Aug 19 13:47:29 2020 +0000 Issue #94 - fix to messed up shebang in setup_expt_fcstonly.py commit c7a708fd54ffe60c6259f35c4230e6e73ecd6f77 Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Date: Tue Aug 18 21:16:19 2020 +0000 Issue #94 adding waves-prdgen for gfsv16 commit 0b2744e53a35c570178b7e6cd7ede72b6255c579 Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Fri Aug 14 17:36:31 2020 +0000 Issue #94 - pull in two fixes for wave job setup in free-forecast mode commit 4888001e76d24277b3a75d1d520945383f49d456 Author: Jessica.Meixner <Jessica.Meixner@noaa.gov> Date: Fri Aug 14 18:55:40 2020 +0000 updates for wave scripts to split them, also added updates from GEFS branch to add extra error checking commit 00dc1973010b68e65e176c90a1eeaef359b7beae Author: Kate.Friedman <Kate.Friedman@noaa.gov> Date: Fri Aug 14 17:36:31 2020 +0000 Issue #94 - pull in two fixes for wave job setup in free-forecast mode commit c2a4f04e50ccb45febf55f7985c64a287973dee0 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 14 08:21:01 2020 -0500 Issue #5 - update for COMINsyn on Orion commit fe849e918b30e6a9ca22ebe1a81e350afc4ed6cf Merge: 0c06cda7 9b923ac3 Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Aug 13 18:49:52 2020 +0000 Issue #94 - Sync merge branch 'feature/gfsv16b' into feature/gfsv16b-restructure commit 9b923ac308841d7accfc6ed2a4ef9733dce2305e Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Aug 13 18:37:51 2020 +0000 Issue #1 - update to prod_util version (1.1.3 -> 1.1.4) on WCOSS-Dell for post P1/P2 removal commit bf0bff444bdd8a02e1c875eadbdc6b60628cff76 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Aug 12 10:00:51 2020 -0500 Issue #5 - update to JGFS_CYCLONE_TRACKER for machine=ORION commit 0c06cda7dd667e936e8aa71fc1c584a4839094ba Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Aug 10 18:50:44 2020 +0000 Issue #94 - update CFP module version on WCOSS-Dell commit b73d25224d8208291048b774a91497928b051713 Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Aug 10 17:58:55 2020 +0000 Issue #94 - update WCOSS-Dell module versions to prod_util and EnvVars commit 485ee56c1e772e8efa944ee9a3f350130d49a718 Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Aug 10 13:00:42 2020 +0000 Issue #94 - fix AWIPS file dependency commit 5a7e45e398efafb4b5b6cde0a69f799a99406d34 Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 7 09:48:45 2020 -0500 Issue #5 - add missing AND condition for wavepostsbs commit bdaa28fbdc2372ed85320a4b044a33d350e2e7be Author: kate.friedman <kate.friedman@noaa.gov> Date: Fri Aug 7 13:34:22 2020 +0000 Issue #94 - updates for FSU tracker commit e8800078f8d00e9447ed81b83eb49135110deb8f Author: kate.friedman <kate.friedman@noaa.gov> Date: Thu Aug 6 14:31:05 2020 -0500 Issue #5 - change UFS_UTILS checkout back to auth repo release/ops-gfsv16 branch after commit to it commit df20d848de2420eacba296ebdf9c9fe68d697351 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Aug 5 15:46:27 2020 -0500 Issue #5 - fix for errant text in setup_workflow_fcstonly.py for waveinit job settings commit 4cee6f65467c34e171ed3e0bdc72458a875e5e21 Author: kate.friedman <kate.friedman@noaa.gov> Date: Wed Aug 5 17:14:04 2020 +0000 Issue #94 - adding -o flag to checkout.sh for optional GTG checkout with EMC_post commit 563d2931378c3d6276212cc9c4e2a4e9a286589c Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Aug 4 18:19:47 2020 +0000 Issue #94 - small fix to updated UFS_UTILS part of link_fv3gfs.sh commit 7c4f8eab074115323a7812dc498e8ea043916718 Author: kate.friedman <kate.friedman@noaa.gov> Date: Tue Aug 4 08:53:39 2020 -0500 Issue #5 - add new APRUNCFP setting to ORION.env commit 5652485ef0cc42f8814df9d08e8b953b025d08b4 Merge: 5cf8a458 d1751309 Author: kate.friedman <kate.friedman@noaa.gov> Date: Mon Aug 3 13:10:27 2020 -0500 Issue #5 - Sync merge branch '…

* Turn on GSD cloud ceiling calculation for RRFS dev. * Updates to UPP for RRFS applications (NOAA-EMC#3) * Updates to UPP for RRFS applications: 1) Adding a RRFS-specific .xml control file and a corresponding .txt flat file. Note that script changes (pending) are needed to leverage the new flat file. However, this code will work in current real-time configurations. 2) Adding GSL experimental ceiling diagnostics, GSL visibility diagnostic, and GSL sea-level pressure reduction (MAPS). Also adding TKE and aerosol number concentrations. 3) Code clean-up for ceiling-related diagnostics; added comments, etc. 4) Removing several non-needed variables, originally inherited from FV3-SAR community configuration. * Updating UPP control files to specify GRIB2 generating center as "noaa_fsl_boulder" and the generating process as "hrrr". The "hrrr" specification is temporary, and will eventually be switched to "rrfs" once required changes to the "NCEPLIBS-g2tmpl" library are available. (NOAA-EMC#4) * Fix some out-of-bounds reads that caused the RRFS UPP to crash. (NOAA-EMC#5) * Adding README file (NOAA-EMC#7) * Adding README file to describe process of making a "flat" file. * Updates to README to improve explanation of input/output files. * Code to read in Flash Flood Guidance (FFG) and Average Recurrence Interval (ARI) precipitation datasets for comparison with model QPF within UPP. * Fixed a syntax error in SURFCE.f * Getting rid of GRIB1 output option to be consistent with rest of code. * Changing field numbers to avoid conflict with existing RRFS-dev1 fields. * Putting exceedance grids in flat files for testing in RRFS UPP. * Corrected the 1h and run total precip names for calculating exceedances in SURFCE.f * Bug fix in SURFCE.f if statements. * Removing changes to RQSTFLD.F since GRIB1 is no longer used in UPP. * Merging NOAA-GSL development on top of NOAA-EMC UPP for testing. * Correcting minor typos in SURFCE.f to allow testing. * Update code based on testing with RRFS cases. * Update part of the code based on current EMC develop branch for comparing the test results with the merged version.(NOAA-EMC#9) * Fixed several bugs in the code. * Modifications to SURFCE.f to check for existence of FFG files. * Bug fixes for FFG file existence check, and changes to handle rotated lat-lon grid interpolation for FFG * Bug fixes for FFG existence checks in SURFCE.f * Another bug fix for SURFCE.f * Updating XML and flat txt files to include a 65th vertical level to be consistent with updated FV3LAM model with higher model top. (NOAA-EMC#13) * Code cleanup for QPF - FFG comparison. Comparison put into subroutine. * Cleanup of SURFCE.f; moving the FFG comparisons into a subroutine. * Final cleanup of exceedance code for QPF vs FFG. * Removing some commented out variable declarations. * Additional cleanup recommended by Ming: we really only need two exceedance variables; one for 1h FFG and one for run total FFG exceedances. * Further cleanup of FFG code, simplifying to two fields (1h acc and run total acc) * Adding ARI comparison fields for 2y, 5y, 10y, and 100y ARIs. * Changes to output 9 soil levels from FV3LAM if we are running 9 level RUC LSM. * Adding flat txt file for UPP. * Commenting out the use of the ARI exceedances for now. We can switch them on later. * Bug fix in INITPOST_NETCDF.f : need to use both ncid2d and ncid3d in this subroutine! * Adding NOAA-GSL code changes on top of latest NOAA-EMC UPP. * Couple of bug fixes in NOAA-EMC code. Bugs were leading to PRMSL and -10C REFD being all zeroes. * Cleaning up code to get rid of unnecessary differences from EMC. * Putting all new GSL variables into EMC's unified post_avblflds.xml. Note that EMC's unified post_avblflds.xml does not validate using the avblflds Schema. * Updating postconfig-NT.txt file for GSL RRFS based on merged post_avblflds.xml file. * Adding RRFS control files to makefile. * Changing back scale for WEASD_ON_SURFACE to previous default, thanks to suggestion from Wen Meng. * Reverting name of cldfra based on feedback from Eric Aligo. * Reverting changes in fv3lam_post_avblflds.xml since GSL new variables are now included in post_avblflds.xml * Changing experimental ceiling level type from "ceiling" to "cloud_ceilng" * Updating 3drtma_postcntrl.xml with revised name for GSD_EXP_CEILING. This also affects postxconfig-NT-3drtma.txt. postxconfig-NT-fv3lam_rrfs.txt also changed due to changes in post_avblflds.xml * Introducing if statement for call of NGMSLP, to avoid calling unless it is needed. Co-authored-by: Ming.Hu <Ming.Hu@noaa.gov> Co-authored-by: Christina Holt <56881914+christinaholtNOAA@users.noreply.github.com> Co-authored-by: Christina Holt <Christina.Holt@noaa.gov> Co-authored-by: Jaymes Kenyon <jaymes.kenyon@noaa.gov> Co-authored-by: Samuel Trahan (NOAA contractor) <39415369+SamuelTrahanNOAA@users.noreply.github.com>

…dates Updates for soca

KateFriedman-NOAA self-assigned this Dec 17, 2019

KateFriedman-NOAA added the port Porting the system to a new platform label Dec 17, 2019

KateFriedman-NOAA added a commit that referenced this issue Jan 9, 2020

Issue #5 - remove unneeded nemsutil module files

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Issue #5 - new ORION files and addition to setup scripts

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KateFriedman-NOAA added a commit that referenced this issue Mar 11, 2020

Issue #5 - sync merge with feature/gfsv16b

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Issue #5 - Merge branch 'feature/gfsv16b' into port2orion

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Issue #5 - added files to .gitignore and MonBuild module files

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Issue #5 - updates to build fv3nc2nemsio and regrid_nemsio

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Issue #5 - updates to build gfs_bufr and tocsbufr

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Issue #5 - other updates to build gfs_bufr and tocsbufr, updates to b…

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…uild enkf_chgres_recenter and prelimiary updates to build enkf_chgres_recenter_nc

KateFriedman-NOAA added a commit that referenced this issue Jul 14, 2020

Issue #5 - add updated cdo module to module_base.orion

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KateFriedman-NOAA added a commit that referenced this issue Jul 14, 2020

Issue #5 - update gitignore for new scripts added recently

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KateFriedman-NOAA added a commit that referenced this issue Jul 14, 2020

Issue #5 - fix updated lmod path and add wavepostsbs to Orion.env if-…

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…block for CFP_MP

KateFriedman-NOAA added a commit that referenced this issue Jul 16, 2020

Issue #5 - updates to GLDAS version, module_base.orion, and ORION.env

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Issue #5 - reverted back to GLDAS feature/orion_port after committing…

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… build fix to it

KateFriedman-NOAA added a commit that referenced this issue Aug 3, 2020

Issue #5 - GLDAS tag update, rocoto module update, UFS_UTILS branch a…

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…nd build update

KateFriedman-NOAA added a commit that referenced this issue Aug 3, 2020

Issue #5 - add setup script settings for HPSSARCH to turn to NO on Or…

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…ion by default

KateFriedman-NOAA added a commit that referenced this issue Aug 4, 2020

Issue #5 - add new APRUNCFP setting to ORION.env

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KateFriedman-NOAA added a commit that referenced this issue Aug 5, 2020

Issue #5 - fix for errant text in setup_workflow_fcstonly.py for wave…

df20d84

…init job settings

KateFriedman-NOAA added a commit that referenced this issue Aug 6, 2020

Issue #5 - change UFS_UTILS checkout back to auth repo release/ops-gf…

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…sv16 branch after commit to it

KateFriedman-NOAA added a commit that referenced this issue Aug 7, 2020

Issue #5 - add missing AND condition for wavepostsbs

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KateFriedman-NOAA added a commit that referenced this issue Aug 12, 2020

Issue #5 - update to JGFS_CYCLONE_TRACKER for machine=ORION

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KateFriedman-NOAA added a commit that referenced this issue Aug 14, 2020

Issue #5 - update for COMINsyn on Orion

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KateFriedman-NOAA added a commit that referenced this issue Aug 19, 2020

Issue #5 - sync merge with feature/gfsv16b after COMPONENT update

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Issue #5 - sync merge with feature/gfsv16b

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DavidHuber-NOAA mentioned this issue Sep 23, 2020

Port global-workflow to S4 #138

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KateFriedman-NOAA added a commit that referenced this issue Sep 23, 2020

Issue #5 - sync merge with feature/gfsv16b_jobname

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KateFriedman-NOAA mentioned this issue Nov 6, 2020

GFSv16 release hand-off state, Orion support, and additional low res R&D updates #174

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GFSv16 release hand-off state, Orion support, and additional low res R&D updates #174

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KateFriedman-NOAA closed this as completed in #174 Nov 6, 2020

KateFriedman-NOAA unpinned this issue Nov 12, 2020

lgannoaa pushed a commit to lgannoaa/global-workflow that referenced this issue Feb 9, 2022

Upgrade UPP with netcdf4 for Dell, Cray and Hera machines. (NOAA-EMC#5)

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AndrewEichmann-NOAA pushed a commit to AndrewEichmann-NOAA/global-workflow that referenced this issue Feb 7, 2024

Merge pull request NOAA-EMC#5 from guillaumevernieres/feature/soca-up…

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Port to Orion #5

Port to Orion #5

KateFriedman-NOAA commented Dec 17, 2019 •

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Port to Orion #5

Port to Orion #5

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KateFriedman-NOAA commented Dec 17, 2019 • edited

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KateFriedman-NOAA commented Dec 17, 2019 •

edited

KateFriedman-NOAA commented Jan 9, 2020 •

edited

KateFriedman-NOAA commented Mar 19, 2020 •

edited