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FOAM FATAL ERROR: [1] bad size -151 #107

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ShifaLin opened this issue Feb 19, 2024 · 0 comments
Closed

FOAM FATAL ERROR: [1] bad size -151 #107

ShifaLin opened this issue Feb 19, 2024 · 0 comments

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@ShifaLin
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Hi, I met the following error, when I was doing simulation calculations on IEA15MW wind turbine by the SOWFA-OpenFAST coupling method. Thanks.
/---------------------------------------------------------------------------
| ========= | |
| \ / F ield | OpenFOAM: The Open Source CFD Toolbox |
| \ / O peration | Version: 2.4.x |
| \ / A nd | Web: www.OpenFOAM.org |
| \/ M anipulation | |
*---------------------------------------------------------------------------*/
Build : 2.4.x
Exec : pisoFoamTurbine.ALMAdvancedOpenFAST -parallel
Date : Feb 19 2024
Time : 20:15:50
Host : "lsf-linux16"
PID : 6045
Case : /home/lsf/OpenFOAM/lsf-2.4.x/15MW-2.3.0-2
nProcs : 3
Slaves :
2
(
"lsf-linux16.6046"
"lsf-linux16.6047"
)

Pstream initialized with:
floatTransfer : 0
nProcsSimpleSum : 0
commsType : nonBlocking
polling iterations : 0
sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE).
fileModificationChecking : Monitoring run-time modified files using timeStampMaster
allowSystemOperations : Allowing user-supplied system call operations

// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time

Create mesh for time = 0

Reading field, p...
Reading field, U...
Creating vorticity field, omega...
Creating second-invariant of strain-rate tensor field, Q...
Reading/calculating face flux field phi

Selecting incompressible transport model Newtonian
Selecting turbulence model type LESModel
Selecting LES turbulence model oneEqEddy
Selecting LES delta type smooth
Selecting LES delta type cubeRootVol
bounding k, min: 0 max: 0 average: 0
oneEqEddyCoeffs
{
ce 0.93;
ck 0.0673;
}

[0] nFASTSubSteps has to be the same for all turbines
[1] nFASTSubSteps has to be the same for all turbines
[2] nFASTSubSteps has to be the same for all turbines


OpenFAST

Copyright (C) National Renewable Energy Laboratory
Copyright (C) Envision Energy USA LTD

This program is licensed under Apache License Version 2.0 and comes with ABSOLUTELY NO WARRANTY.
See the "LICENSE" file distributed with this software for details.


OpenFAST-HEAD-HASH-NOTFOUND
Compile Info:

  • Architecture: 64 bit
  • Precision: double
  • Date: Feb 17 2024
  • Time: 20:35:02
    Execution Info:
  • Date: 02/19/2024
  • Time: 20:15:51+0800

OpenFAST input file heading:
IEA 15 MW offshore reference model on UMaine VolturnUS-S semi-submersible floating platform

Running ElastoDyn.
Running AeroDyn.
Running BEM.
Running UnsteadyAero.
Warning: Turning off Unsteady Aerodynamics because C_nalpha is 0. BladeNode = 1, Blade = 1
Warning: Turning off Unsteady Aerodynamics because C_nalpha is 0. BladeNode = 2, Blade = 1
Warning: Turning off Unsteady Aerodynamics because C_nalpha is 0. BladeNode = 1, Blade = 2
Warning: Turning off Unsteady Aerodynamics because C_nalpha is 0. BladeNode = 2, Blade = 2
Warning: Turning off Unsteady Aerodynamics because C_nalpha is 0. BladeNode = 1, Blade = 3
Warning: Turning off Unsteady Aerodynamics because C_nalpha is 0. BladeNode = 2, Blade = 3
Running InflowWind.
Running ServoDyn.
HDF5-DIAG: Error detected in HDF5 (1.8.16) thread 140345743763264:
#000: ../../../src/H5Pdcpl.c line 870 in H5Pset_chunk(): all chunk dimensions must be positive
major: Invalid arguments to routine
minor: Out of range
[1]
[2]
[0]
[0]
[0] --> FOAM FATAL ERROR:
[0] [2]
[2] --> FOAM FATAL ERROR:
[2] [1]
[1] --> FOAM FATAL ERROR:
[1] bad size -151
[1]
[1] From function List::List(const label size, const T&)
[1] in file /home/lsf/OpenFOAM/OpenFOAM-2.4.x/src/OpenFOAM/lnInclude/List.Cbad size -151
[0]
[0] From function List::List(const label size, const T&)
[0] in file /home/lsf/OpenFOAM/OpenFOAM-2.4.x/src/OpenFOAM/lnInclude/List.C at line 69.
[0]
FOAM parallel run aborting
[0]
at line 69.
[1]
FOAM parallel run aborting
[1]
bad size -151
[2]
[2] From function List::List(const label size, const T&)
[2] in file /home/lsf/OpenFOAM/OpenFOAM-2.4.x/src/OpenFOAM/lnInclude/List.C at line 69.
[2]
FOAM parallel run aborting
[2]
[0] #0 [1] #0 [2] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&) at ??:?
[2] #1 Foam::error::abort() at ??:?
at ??:?
[0] #1 Foam::error::abort()[1] #1 Foam::error::abort() at ??:?
[2] #2 ? at ??:?
[1] #2 ? at ??:?
[0] #2 ? at horizontalAxisWindTurbinesALMOpenFAST.C:?
[2] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::initializeArrays() at horizontalAxisWindTurbinesALMOpenFAST.C:?
[1] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::initializeArrays() at horizontalAxisWindTurbinesALMOpenFAST.C:?
[0] #3 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::initializeArrays() at ??:?
[2] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::initialize() at ??:?
[1] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::initialize() at ??:?
[0] #4 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::initialize() at ??:?
[2] #5 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::horizontalAxisWindTurbinesALMOpenFAST(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&) at ??:?
[1] #5 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::horizontalAxisWindTurbinesALMOpenFAST(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&) at ??:?
[0] #5 Foam::turbineModels::horizontalAxisWindTurbinesALMOpenFAST::horizontalAxisWindTurbinesALMOpenFAST(Foam::GeometricField<Foam::Vector, Foam::fvPatchField, Foam::volMesh> const&) at ??:?
[2] #6 at ??:?
[1] #6 at ??:?
[0] #6 ??? at ??:?
at ??:?
[2] #7 __libc_start_main at [0] #7 __libc_start_main??:?
[1] #7 __libc_start_main in "/lib/x86_64-linux-gnu/libc.so.6" in "/lib/x86_64-linux-gnu/ in "/lib/x86_64-linux-gnu/libc.so.6"
[0] #8
[1] #8 libc.so.6"
[2] #8 ??? at ??:?

MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.

at ??:?
at ??:?
[lsf-linux16:06043] 2 more processes have sent help message help-mpi-api.txt / mpi-abort
[lsf-linux16:06043] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages

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