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python3Packages.cnvkit: fix build
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Jonathan Ringer committed Jul 8, 2020
1 parent 26dea04 commit 58134d6
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4 changes: 4 additions & 0 deletions pkgs/development/python-modules/cnvkit/default.nix
Expand Up @@ -6,6 +6,7 @@
, biopython
, numpy
, scipy
, scikitlearn
, pandas
, matplotlib
, reportlab
Expand All @@ -29,6 +30,7 @@ buildPythonPackage rec {
biopython
numpy
scipy
scikitlearn
pandas
matplotlib
reportlab
Expand All @@ -44,6 +46,8 @@ buildPythonPackage rec {
--replace "pandas >= 0.20.1, < 0.25.0" "pandas"
'';

pythonImportsCheck = [ "cnvlib" ];

meta = with lib; {
homepage = "https://cnvkit.readthedocs.io";
description = "A Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data";
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