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[20.09] python3Packages.graspy: 0.2.0 -> 0.3.0; unbreak tests #98308

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Sep 20, 2020
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[20.09] python3Packages.graspy: 0.2.0 -> 0.3.0; unbreak tests #98308

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798a2e3
python3Packages.hyppo: init at 0.1.3
bcdarwin Sep 10, 2020
98bfcfa
python3Packages.graspy: 0.2.0 -> 0.3.0
bcdarwin Sep 10, 2020
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19 changes: 8 additions & 11 deletions pkgs/development/python-modules/graspy/default.nix
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Original file line number Diff line number Diff line change
Expand Up @@ -2,8 +2,9 @@
, buildPythonPackage
, isPy27
, fetchFromGitHub
, pytest
, pytestCheckHook
, pytestcov
, hyppo
, matplotlib
, networkx
, numpy
Expand All @@ -14,18 +15,19 @@

buildPythonPackage rec {
pname = "graspy";
version = "0.2";
version = "0.3";

disabled = isPy27;

src = fetchFromGitHub {
owner = "neurodata";
repo = pname;
rev = "v${version}";
sha256 = "1ss7d71lwblimg7ri88ir9w59j0ri13wl75091hjf7q0mchqr6yd";
sha256 = "0lab76qiryxvwl6zrcikhnxil1xywl0wkkm2vzi4v9mdzpa7w29r";
};

propagatedBuildInputs = [
hyppo
matplotlib
networkx
numpy
Expand All @@ -34,14 +36,9 @@ buildPythonPackage rec {
seaborn
];

checkInputs = [ pytest pytestcov ];

checkPhase = ''
runHook preCheck
# `test_autogmm` takes too long; fixed in next release (graspy/pull/328)
pytest tests -k 'not test_autogmm'
runHook postCheck
'';
checkInputs = [ pytestCheckHook pytestcov ];
pytestFlagsArray = [ "tests" "--ignore=docs" ];
disabledTests = [ "gridplot_outputs" ];

meta = with lib; {
homepage = "https://graspy.neurodata.io";
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40 changes: 40 additions & 0 deletions pkgs/development/python-modules/hyppo/default.nix
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Original file line number Diff line number Diff line change
@@ -0,0 +1,40 @@
{ lib
, buildPythonPackage
, isPy27
, fetchFromGitHub
, pytestCheckHook , pytestcov , numba
, numpy
, scikitlearn
, scipy
}:

buildPythonPackage rec {
pname = "hyppo";
version = "0.1.3";

disabled = isPy27;

src = fetchFromGitHub {
owner = "neurodata";
repo = pname;
rev = "v${version}";
sha256 = "0qdnb1l4hz4dgwhapz1fp9sb2vxxvr8h2ngsbvyf50h3kapcn19r";
};

propagatedBuildInputs = [
numba
numpy
scikitlearn
scipy
];

checkInputs = [ pytestCheckHook pytestcov ];
pytestFlagsArray = [ "--ignore=docs" ];

meta = with lib; {
homepage = "https://github.com/neurodata/hyppo";
description = "Indepedence testing in Python";
license = licenses.asl20;
maintainers = with maintainers; [ bcdarwin ];
};
}
2 changes: 2 additions & 0 deletions pkgs/top-level/python-packages.nix
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Expand Up @@ -2759,6 +2759,8 @@ in {

hypothesis = if isPy3k then callPackage ../development/python-modules/hypothesis { } else self.hypothesis_4;

hyppo = callPackage ../development/python-modules/hyppo { };

i3ipc = callPackage ../development/python-modules/i3ipc { };

i3-py = callPackage ../development/python-modules/i3-py { };
Expand Down