Add read permissions

.gitignore

@@ -1,3 +1,4 @@
+*~
 .idea
 /web.config
 /node_modules/

js/components/security/access/configure-access-modal.html

@@ -3,46 +3,80 @@
 										 data: {
 										    classes: classes,
 										    isLoading: isLoading,
-										    roleName: roleName,
-										    columns: columns,
-										    accessList: accessList,
+										    readRoleName: readRoleName,
+		                                                                    writeRoleName: writeRoleName,
+										    writeAccessColumns: writeAccessColumns,
+		                                                                    readAccessColumns: readAccessColumns,
+										    writeAccessList: writeAccessList,
+		                                                                    readAccessList: readAccessList,
 										    grantAccess: grantAccess,
 										    revokeRoleAccess: revokeRoleAccess,
-										    roleOptions: roleOptions,
-										    roleSearch: roleSearch
+										    readRoleOptions: readRoleOptions,
+										    readRoleSearch: readRoleSearch,
+		                                                                    writeRoleOptions: writeRoleOptions,
+										    writeRoleSearch: writeRoleSearch
 										 }">
     <loading data-bind="css: classes('loading-panel'), visible: isLoading()" params="status: ko.i18n('common.configureAccessModal.loadingAccessList', 'Loading access list...')"></loading>
     <div data-bind="css: classes()">
         <div data-bind="if: !isLoading()">
             <div data-bind="css: classes('new-access')">
-                <label data-bind="css: classes('new-access-label'), text: ko.i18n('common.configureAccessModal.addWriteAccessToRole', 'Add write access to role:')"></label>
+                <label data-bind="css: classes('new-access-label'), text: ko.i18n('common.configureAccessModal.addWriteAccessToRole', 'Add WRITE access to role:')"></label>
                 <div class="input-group"
                      data-bind="css: classes({ element: 'new-access-btn-group', extra: ['new-access-btn-group'] })">
                     <input
                         class="form-control"
                         data-bind="
-                            textInput: roleSearch,
-                            value: roleName,
+                            textInput: writeRoleSearch,
+                            value: writeRoleName,
                             eventType: 'blur',
-                            ko_autocomplete: { source: roleOptions(), minLength: 0, maxShowItems: 10, scroll: true }"
+                            ko_autocomplete: { source: writeRoleOptions(), minLength: 0, maxShowItems: 10, scroll: true }"
                     >
                     <span class="input-group-btn">
-                        <button class="btn btn-primary" type="button" data-bind="click: grantAccess, attr: { disabled: !(roleName() && roleName().length) }, text: ko.i18n('common.add', 'Add')"></button>
+                        <button class="btn btn-primary" type="button" data-bind="click: grantAccess.bind($data,'WRITE'), attr: { disabled: !(writeRoleName() && writeRoleName().length) }, text: ko.i18n('common.add', 'Add')"></button>
                     </span>
                 </div>
                 <div data-bind="css: classes('access-list')">
-                    <label data-bind="css: classes('access-list-label'), text: ko.i18n('common.configureAccessModal.rolesWithWriteAccess', 'Roles with write access:')"></label>
+                    <label data-bind="css: classes('access-list-label'), text: ko.i18n('common.configureAccessModal.rolesWithWriteAccess', 'Roles with WRITE access:')"></label>
                     <div>
                         <table data-bind="
                             css: classes({ element: 'access-table', extra: ['table', 'table-bordered', 'table-hover'] }),
                             dataTable:{
-                                data: accessList,
-                                options: {columns: columns, language: ko.i18n('datatable.language')},
+                                data: writeAccessList,
+                                options: {columns: writeAccessColumns, language: ko.i18n('datatable.language')},
                             }
                         "/>
                     </div>
                 </div>
-            </div>
+	    </div>
+	    <div data-bind="css: classes('new-access')">
+		<label data-bind="css: classes('new-access-label'), text: ko.i18n('common.configureAccessModal.addReadAccessToRole', 'Add READ access to role:')"></label>
+                <div class="input-group"
+                     data-bind="css: classes({ element: 'new-access-btn-group', extra: ['new-access-btn-group'] })">
+                    <input
+                        class="form-control"
+                        data-bind="
+                            textInput: readRoleSearch,
+                            value: readRoleName,
+                            eventType: 'blur',
+                            ko_autocomplete: { source: readRoleOptions(), minLength: 0, maxShowItems: 10, scroll: true }"
+                    >
+                    <span class="input-group-btn">
+                        <button class="btn btn-primary" type="button" data-bind="click: grantAccess.bind($data,'READ'), attr: { disabled: !(readRoleName() && readRoleName().length) }, text: ko.i18n('common.add', 'Add')"></button>
+                    </span>
+                </div>
+		<div data-bind="css: classes('access-list')">
+                    <label data-bind="css: classes('access-list-label'), text: ko.i18n('common.configureAccessModal.rolesWithReadAccess', 'Roles with READ access:')"></label>
+                    <div>
+                        <table data-bind="
+                            css: classes({ element: 'access-table', extra: ['table', 'table-bordered', 'table-hover'] }),
+                            dataTable:{
+                                data: readAccessList,
+                                options: {columns: readAccessColumns, language: ko.i18n('datatable.language')},
+                            }
+                        "/>
+                    </div>
+		</div>
+	    </div>
         </div>
     </div>
-</atlas-modal>
+</atlas-modal>

js/components/security/access/configure-access-modal.js

@@ -19,80 +19,124 @@ define([
 
 			this.isModalShown = params.isModalShown;
 			this.isLoading = ko.observable(false);
-			this.accessList = ko.observable([]);
-			this.roleName = ko.observable();
 
-			this.roleSuggestions = ko.observable([]);
-			this.roleOptions = ko.computed(() => this.roleSuggestions().map(r => r.name));
-			this.roleSearch = ko.observable();
-			this.roleSearch.subscribe(str => this.loadRoleSuggestions(str));
+		        this.writeRoleName = ko.observable();
+		        this.writeAccessList = ko.observable([]);		    
+			this.writeRoleSuggestions = ko.observable([]);
+			this.writeRoleOptions = ko.computed(() => this.writeRoleSuggestions().map(r => r.name));
+			this.writeRoleSearch = ko.observable();
+		        this.writeRoleSearch.subscribe(str => this.loadWriteRoleSuggestions(str));
+
+		        this.readAccessList = ko.observable([]);
+		        this.readRoleName = ko.observable();		    
+		        this.readRoleSuggestions = ko.observable([]);
+			this.readRoleOptions = ko.computed(() => this.readRoleSuggestions().map(r => r.name));
+			this.readRoleSearch = ko.observable();
+			this.readRoleSearch.subscribe(str => this.loadReadRoleSuggestions(str));
 
 			this.isOwnerFn = params.isOwnerFn;
 			this.grantAccessFn = params.grantAccessFn;
 			this.loadAccessListFn = params.loadAccessListFn;
 			this.revokeAccessFn = params.revokeAccessFn;
 			this.loadRoleSuggestionsFn = params.loadRoleSuggestionsFn;
 
-			this.columns = [
+			this.readAccessColumns = [
+				{
+					class: this.classes('access-tbl-col-id'),
+					title: ko.i18n('readAccessColumns.id', 'ID'),
+					data: 'id'
+				},
+				{
+					class: this.classes('access-tbl-col-name'),
+					title: ko.i18n('readAccessColumns.name', 'Name'),
+					data: 'name'
+				},
+				{
+					class: this.classes('access-tbl-col-action'),
+					title: ko.i18n('readAccessColumns.action', 'Action'),
+					render: (s, p, d) => !this.isOwnerFn(d.name) ? `<a data-bind="css: '${this.classes('revoke-link')}', click: revoke, text: ko.i18n('common.configureAccessModal.revoke', 'Revoke')"></a>` : '-'
+				}
+			];
+
+		        this.writeAccessColumns = [
 				{
 					class: this.classes('access-tbl-col-id'),
-					title: ko.i18n('columns.id', 'ID'),
+					title: ko.i18n('writeAccessColumns.id', 'ID'),
 					data: 'id'
 				},
 				{
 					class: this.classes('access-tbl-col-name'),
-					title: ko.i18n('columns.name', 'Name'),
+					title: ko.i18n('writeAccessColumns.name', 'Name'),
 					data: 'name'
 				},
 				{
 					class: this.classes('access-tbl-col-action'),
-					title: ko.i18n('columns.action', 'Action'),
+					title: ko.i18n('writeAccessColumns.action', 'Action'),
 					render: (s, p, d) => !this.isOwnerFn(d.name) ? `<a data-bind="css: '${this.classes('revoke-link')}', click: revoke, text: ko.i18n('common.configureAccessModal.revoke', 'Revoke')"></a>` : '-'
 				}
 			];
 
 			this.isModalShown.subscribe(open => !!open && this.loadAccessList());
 		}
 
-		async _loadAccessList() {
-			let accessList = await this.loadAccessListFn();
-			accessList = accessList.map(a => ({ ...a, revoke: () => this.revokeRoleAccess(a.id) }));
-			this.accessList(accessList);
+		async _loadReadAccessList() {
+			let accessList = await this.loadAccessListFn('READ');
+		        accessList = accessList.map(a => ({ ...a, revoke: () => this.revokeRoleAccess(a.id, 'READ') }));
+			this.readAccessList(accessList);
+		}
+
+	        async _loadWriteAccessList() {
+			let accessList = await this.loadAccessListFn('WRITE');
+		        accessList = accessList.map(a => ({ ...a, revoke: () => this.revokeRoleAccess(a.id, 'WRITE') }));
+			this.writeAccessList(accessList);
 		}
 
-		async loadRoleSuggestions() {
-			const res = await this.loadRoleSuggestionsFn(this.roleSearch());
-			this.roleSuggestions(res);
+		async loadReadRoleSuggestions() {
+			const res = await this.loadRoleSuggestionsFn(this.readRoleSearch());
+			this.readRoleSuggestions(res);
+		}
+
+	    	async loadWriteRoleSuggestions() {
+			const res = await this.loadRoleSuggestionsFn(this.writeRoleSearch());
+			this.writeRoleSuggestions(res);
 		}
 
 		async loadAccessList() {
-			this.isLoading(false);
+			this.isLoading(true);
 			try {
-				await this._loadAccessList();
+			        await this._loadReadAccessList();
+			        await this._loadWriteAccessList();
 			} catch (ex) {
 				console.log(ex);
 			}
 			this.isLoading(false);
 		}
 
-		async grantAccess() {
+		async grantAccess(perm_type) {
 			this.isLoading(true);
 			try {
-				const role = this.roleSuggestions().find(r => r.name === this.roleName());
-				await this.grantAccessFn(role.id);
-				await this._loadAccessList();
-				this.roleName('');
+			       if (perm_type == 'WRITE'){
+				   const role = this.writeRoleSuggestions().find(r => r.name === this.writeRoleName());
+			           await this.grantAccessFn(role.id,'WRITE');
+				   await this._loadWriteAccessList();
+				   this.writeRoleName('');
+  			       } else {
+				   const role = this.readRoleSuggestions().find(r => r.name === this.readRoleName());
+			   	   await this.grantAccessFn(role.id,'READ');
+				   await this._loadReadAccessList();
+				   this.readRoleName('');
+			       }
 			} catch (ex) {
 				console.log(ex);
 			}
 			this.isLoading(false);
 		}
 
-		async revokeRoleAccess(roleId) {
+	        async revokeRoleAccess(roleId, perm_type) {
 			this.isLoading(true);
-			try {
-				await this.revokeAccessFn(roleId);
-				await this._loadAccessList();
+		        try {
+			    await this.revokeAccessFn(roleId, perm_type);
+			    await this.loadAccessList();
 			} catch (ex) {
 				console.log(ex);
 			}

js/pages/characterizations/components/characterizations/characterization-view-edit.html

@@ -20,10 +20,14 @@
                 <!-- ko ifnot: isNewEntity() -->
                 <button type="button" class="btn btn-primary" data-bind="click: () => isTagsModalShown(!isTagsModalShown()), visible: isEditPermitted() && !previewVersion(), css: { disabled: isProcessing() }, title: ko.i18n('common.tags', 'Tags')"><i class="fa fa-tags"></i></button>
                 <button type="button" class="btn btn-primary" data-bind="visible: !previewVersion(), click: copyCc, css: {disabled: !canCopy() || isProcessing() }, title: , title: ko.i18n('common.createACopy', 'Create a copy')"><i class="fa fa-copy"></i></button>
+
+		<!-- ko if: enablePermissionManagement -->
                 <button class="btn btn-primary" data-bind="visible: isOwner() && !previewVersion(), click: () => isAccessModalShown(!isAccessModalShown()), title: ko.i18n('common.configureAccess', 'Configure access')">
                     <i class="fa fa-lock"></i>
                 </button>
-                <button type="button" class="btn btn-danger"  data-bind="visible: !previewVersion(), click: deleteCc, css: {disabled: !$component.isDeletePermitted() || isProcessing() }"><i class="fa fa-trash-alt"></i></button>
+		<!-- /ko -->
+
+		<button type="button" class="btn btn-danger"  data-bind="visible: !previewVersion(), click: deleteCc, css: {disabled: !$component.isDeletePermitted() || isProcessing() }"><i class="fa fa-trash-alt"></i></button>
                 <!-- /ko -->
             </div>
         </div>
@@ -103,4 +107,4 @@
 	loadAvailableTagsFn: $component.loadAvailableTags,
 	checkAssignPermissionFn: $component.checkAssignPermission,
 	checkUnassignPermissionFn: $component.checkUnassignPermission
-"></tags-modal>
+"></tags-modal>

js/pages/characterizations/components/characterizations/characterization-view-edit.js

@@ -71,6 +71,10 @@ define([
             this.areStratasNamesEmpty = ko.observable();
             this.duplicatedStrataNames = ko.observable([]);
 
+	    this.enablePermissionManagement = ko.pureComputed(() => {
+		return config.enablePermissionManagement;
+	    });	    
+
             this.designDirtyFlag = sharedState.CohortCharacterization.dirtyFlag;
             this.loading = ko.observable(false);
             this.defaultName = ko.unwrap(constants.newEntityNames.characterization);

js/pages/characterizations/components/feature-analyses/feature-analysis-view-edit.html

@@ -17,9 +17,13 @@
                 <button class="btn btn-primary" data-bind="click: closeAnalysis, enable: !isProcessing(), title: ko.i18n('common.close', 'Close')"><i class="fa fa-times"></i></button>
                 <!-- ko ifnot: isNewEntity -->
                 <button type="button" class="btn btn-primary" data-bind="click: copyFeatureAnalysis, css: {disabled: !canCopy() || isProcessing() }, title: ko.i18n('common.createACopy', 'Create a copy')"><i class="fa fa-copy"></i></button>
+
+		<!-- ko if: enablePermissionManagement -->
                 <button class="btn btn-primary" data-bind="visible: isOwner, enable: !isProcessing(), click: () => isAccessModalShown(!isAccessModalShown()), title: ko.i18n('common.configureAccess', 'Configure access')">
                     <i class="fa fa-lock"></i>
                 </button>
+		<!-- /ko -->
+
                 <button class="btn btn-danger" data-bind="click: deleteFeature, enable: canDelete() && !isProcessing(), title: ko.i18n('common.delete', 'Delete')"><i class="fa fa-trash-alt"></i></button>
                 <!-- /ko -->
             </div>
@@ -53,4 +57,4 @@
 	grantAccessFn: $component.grantAccess,
 	revokeAccessFn: $component.revokeAccess,
 	loadRoleSuggestionsFn: $component.loadAccessRoleSuggestions
-"></configure-access-modal>
+"></configure-access-modal>

js/pages/characterizations/components/feature-analyses/feature-analysis-view-edit.js

@@ -153,6 +153,10 @@ define([
             });
             this.editorClasses = ko.computed(() => this.classes({ element: 'content', modifiers: this.canEdit() ? '' : 'disabled' }))
 
+	    this.enablePermissionManagement = ko.pureComputed(() => {
+		return config.enablePermissionManagement;
+	    });
+
             this.selectedTabKey = ko.observable();
             this.componentParams = ko.observable({
               ...params,

js/pages/cohort-definitions/cohort-definition-manager.html

@@ -31,12 +31,15 @@
 						data-bind="visible: !previewVersion(), title: ko.i18n('cohortDefinitions.cohortDefinitionManager.createCopyCohortTitle', 'Create a copy of this cohort definition'), click: copy, enable: canCopy() && !isProcessing()"><i
 							class="fa fa-copy"></i></button>
 					<button class="btn btn-primary"
-						data-bind="visible: !previewVersion(), title: ko.i18n('cohortDefinitions.cohortDefinitionManager.getLinkCohortTitle', 'Get a link to this cohort definition'), enable: !dirtyFlag().isDirty() && !isProcessing(), click: function () { $component.cohortLinkModalOpened(true) }"><i
-							class="fa fa-link"></i></button>
+						data-bind="visible: !previewVersion(), title: ko.i18n('cohortDefinitions.cohortDefinitionManager.getLinkCohortTitle', 'Get a link to this cohort definition'), enable: !dirtyFlag().isDirty() && !isProcessing(), click: function () { $component.cohortLinkModalOpened(true) }"><i class="fa fa-link"></i></button>
+
+					<!-- ko if: enablePermissionManagement -->
 					<button class="btn btn-primary"
 						data-bind="title: ko.i18n('common.configureAccess', 'Configure access'), visible: isOwner() && !previewVersion(), click: () => isAccessModalShown(!isAccessModalShown())">
 						<i class="fa fa-lock"></i>
 					</button>
+					<!-- /ko -->
+
 					<!-- ko if: !isRunning() -->
 					<button class="btn btn-danger"
 						data-bind="visible: !previewVersion(), title: ko.i18n('common.delete', 'Delete'), click: $component.delete, enable: canDelete() && !isProcessing()"><i
@@ -790,4 +793,4 @@ <h3 data-bind="text: ko.i18n('cohortDefinitions.cohortDefinitionManager.panels.a
 	</div>
 </script>
 
-<!-- /ko -->
+<!-- /ko -->

js/pages/cohort-definitions/cohort-definition-manager.js

@@ -194,10 +194,13 @@ define(['jquery', 'knockout', 'text!./cohort-definition-manager.html',
 			super(params);
 
 			this.previewVersion = sharedState.CohortDefinition.previewVersion;
-
+		    
 			this.pollTimeoutId = null;
 			this.authApi = authApi;
-			this.config = config;
+		        this.config = config;
+		        this.enablePermissionManagement = ko.pureComputed(() => {
+			       return config.enablePermissionManagement;
+		        });
 			this.relatedSourcecodesOptions = globalConstants.relatedSourcecodesOptions;
 			this.commonUtils = commonUtils;
 			this.isLoading = ko.observable(false);

js/pages/concept-sets/conceptset-manager.html

@@ -26,9 +26,13 @@
         <!-- ko if: $component.currentConceptSet().id != null && $component.currentConceptSet().id != 0 -->
         <button type="button" class="btn btn-primary" data-bind="click: () => isTagsModalShown(!isTagsModalShown()), visible: canEdit() && !previewVersion(), css: { disabled: isProcessing() }, title: ko.i18n('common.tags', 'Tags')"><i class="fa fa-tags"></i></button>
         <button type="button" class="btn btn-primary" data-bind="visible: !previewVersion(), click: optimize, css: { disabled: !canOptimize() || isProcessing() }, text: ko.i18n('cs.manager.optimize', 'Optimize')"></button>
+
+	<!-- ko if: enablePermissionManagement -->
         <button class="btn btn-primary" data-bind="visible: !previewVersion() && isOwner(), click: () => isAccessModalShown(!isAccessModalShown()), title: ko.i18n('common.configureAccess', 'Configure access')">
             <i class="fa fa-lock"></i>
         </button>
+	<!-- /ko -->
+
         <button type="button" class="btn btn-danger" data-bind="visible: !previewVersion(), click: $component.delete, css: { disabled: !canDelete() || isProcessing() }, title: ko.i18n('common.delete', 'Delete')"><i class="fa fa-trash-alt"></i></button>
         <!-- /ko -->
       </div>