'Concept poss_eq to' is no longer a replacement relationship [AVOF-3572]

OHDSI · Jun 1, 2022 · e41fe27 · e41fe27
1 parent 5f6489f
commit e41fe27
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Showing 6 changed files with 0 additions and 26 deletions.
diff --git a/CIEL/load_stage.sql b/CIEL/load_stage.sql
@@ -567,7 +567,6 @@ CREATE UNLOGGED TABLE ciel_to_concept_map AS
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 

diff --git a/HCPCS/load_stage.sql b/HCPCS/load_stage.sql
@@ -1166,7 +1166,6 @@ WHERE c.concept_id = r.concept_id_1
 		'Concept replaced by',
 		'Concept same_as to',
 		'Concept alt_to to',
-		'Concept poss_eq to',
 		'Concept was_a to'
 		)
 	AND r.invalid_reason IS NULL
@@ -1216,7 +1215,6 @@ WHERE NOT EXISTS (
 				'Concept replaced by',
 				'Concept same_as to',
 				'Concept alt_to to',
-				'Concept poss_eq to',
 				'Concept was_a to'
 				)
 			AND crs_int.invalid_reason IS NULL

diff --git a/RxNorm_E/RxNorm_cleanup.sql b/RxNorm_E/RxNorm_cleanup.sql
@@ -141,8 +141,6 @@ FROM (
 							THEN 2
 						WHEN r.relationship_id = 'Concept alt_to to'
 							THEN 3
-						WHEN r.relationship_id = 'Concept poss_eq to'
-							THEN 4
 						WHEN r.relationship_id = 'Concept was_a to'
 							THEN 5
 						WHEN r.relationship_id = 'Maps to'
@@ -156,7 +154,6 @@ FROM (
 							'Concept replaced by',
 							'Concept same_as to',
 							'Concept alt_to to',
-							'Concept poss_eq to',
 							'Concept was_a to'
 							)
 						OR (
@@ -320,7 +317,6 @@ FROM (
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 				AND r.invalid_reason IS NULL
@@ -353,7 +349,6 @@ WHERE NOT EXISTS (
 				'Concept replaced by',
 				'Concept same_as to',
 				'Concept alt_to to',
-				'Concept poss_eq to',
 				'Concept was_a to'
 				)
 		)
@@ -388,7 +383,6 @@ FROM (
 			'Concept replaced by',
 			'Concept same_as to',
 			'Concept alt_to to',
-			'Concept poss_eq to',
 			'Concept was_a to',
 			'Maps to'
 			)
@@ -425,7 +419,6 @@ FROM (
 			'Concept replaced by',
 			'Concept same_as to',
 			'Concept alt_to to',
-			'Concept poss_eq to',
 			'Concept was_a to',
 			'Maps to'
 			)

diff --git a/working/generic_update.sql b/working/generic_update.sql
@@ -379,7 +379,6 @@ BEGIN
 			'Concept replaced by',
 			'Concept same_as to',
 			'Concept alt_to to',
-			'Concept poss_eq to',
 			'Concept was_a to',
 			'Maps to']) AS relationship_id
 		),
@@ -482,7 +481,6 @@ BEGIN
 			'Concept replaced by',
 			'Concept same_as to',
 			'Concept alt_to to',
-			'Concept poss_eq to',
 			'Concept was_a to',
 			'Maps to',
 			'Maps to value',
@@ -532,7 +530,6 @@ BEGIN
 			'Concept replaced by',
 			'Concept same_as to',
 			'Concept alt_to to',
-			'Concept poss_eq to',
 			'Concept was_a to',
 			'Maps to',
 			'Maps to value',
@@ -610,7 +607,6 @@ BEGIN
 			'Concept replaced by',
 			'Concept same_as to',
 			'Concept alt_to to',
-			'Concept poss_eq to',
 			'Concept was_a to'
 			)
 		AND v.latest_update IS NOT NULL -- only for current vocabularies
@@ -634,7 +630,6 @@ BEGIN
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 			)
@@ -738,7 +733,6 @@ BEGIN
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 				)
 				AND r.invalid_reason IS NULL
@@ -770,7 +764,6 @@ BEGIN
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 			)
@@ -825,7 +818,6 @@ BEGIN
 			'Concept replaced by',
 			'Concept same_as to',
 			'Concept alt_to to',
-			'Concept poss_eq to',
 			'Concept was_a to',
 			'Maps to'
 			)

diff --git a/working/packages/QA_TESTS/create_qa_tests.sql b/working/packages/QA_TESTS/create_qa_tests.sql
@@ -395,7 +395,6 @@ AS $BODY$
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 				)
@@ -599,7 +598,6 @@ AS $BODY$
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 				AND r_int.invalid_reason IS NULL

diff --git a/working/packages/vocabulary_pack/CheckReplacementMappings.sql b/working/packages/vocabulary_pack/CheckReplacementMappings.sql
@@ -25,7 +25,6 @@ BEGIN
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 				AND invalid_reason IS NULL
@@ -51,14 +50,12 @@ BEGIN
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 				AND cs2.relationship_id IN (
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 				AND crs.concept_code_1 = cs1.concept_code_1
@@ -85,7 +82,6 @@ BEGIN
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 			)
@@ -144,7 +140,6 @@ BEGIN
 						'Concept replaced by',
 						'Concept same_as to',
 						'Concept alt_to to',
-						'Concept poss_eq to',
 						'Concept was_a to'
 						)
 					AND crs.concept_code_1 <> crs.concept_code_2
@@ -193,7 +188,6 @@ BEGIN
 					'Concept replaced by',
 					'Concept same_as to',
 					'Concept alt_to to',
-					'Concept poss_eq to',
 					'Concept was_a to'
 					)
 			)