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24 Open 53 Closed
24 Open 53 Closed
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Issues list

Wrong plot_goodness_of_fit if different order of rows in measurement_df and simulation_df bug Something isn't working visualization
#247 opened Feb 27, 2024 by plakrisenko
Validator: check datasetId in visualizations table exists in measurements table validation
#229 opened Oct 11, 2023 by dilpath
@dweindl
API for creating petab problems from scratch
#220 opened Jul 25, 2023 by dweindl
Validator does not check for required column noiseFormula in observables table
#219 opened Jul 25, 2023 by dweindl
Improve error handling in Problem.from_yaml - parameter_file
#218 opened Jul 25, 2023 by dweindl
Improve error handling in Problem.from_yaml - format_version validation
#217 opened Jul 25, 2023 by dweindl
petab.get_model_for_condition may remove rateRules where it shouldn't bug Something isn't working
#197 opened Apr 17, 2023 by dweindl
Validator: Add option to warn about unused / non-standard columns enhancement New feature or request validation
#128 opened Apr 22, 2022 by dweindl
Python API for linter enhancement New feature or request
#35 opened Feb 16, 2021 by yannikschaelte
2
single objectivePriorParameters are cast to numpy.float64
#27 opened Aug 27, 2020 by FFroehlich
7
writer functions do not perform sanity checks + use misleading options for writing tsv
#26 opened Aug 24, 2020 by FFroehlich
11
Should unspecified optional strings be the empty string or NaN? question Further information is requested
#25 opened Jun 18, 2020 by dilpath
4
Visualization of measurements without condition table and visualization table visualization
#22 opened May 13, 2020 by dweindl
@plakrisenko
Visualization: if column 'XValues' not provided and multiple conditions should be plotted automatically visualization
#21 opened Apr 21, 2020 by erikadudki
2
consistent coloring of legend entries across plots visualization
#18 opened Feb 21, 2020 by FFroehlich
1
xOffset for logscale xValues question Further information is requested visualization
#17 opened Feb 21, 2020 by FFroehlich
1
BarPlots ignore xValues visualization
#16 opened Feb 21, 2020 by FFroehlich
@plakrisenko @MerktSimon
6
Parallelize plotting for large amounts of subplots (saved to files) visualization
#11 opened Jan 24, 2020 by MerktSimon
@MerktSimon
Implement validation CompositeProblem validation
#9 opened Dec 16, 2019 by dweindl
3 tasks
Add support for multiple models per petab.Problem
#6 opened Dec 16, 2019 by dweindl
Add function to create joint parameter table from multiple models and measurement files
#5 opened Dec 16, 2019 by dweindl
1
Add: Allow plotting by observableID & simCondID at the same time visualization
#4 opened Sep 30, 2019 by MerktSimon
add: plotting STD if the column noiseParameter has values and no replicates available visualization
#3 opened Aug 20, 2019 by erikadudki
1
add case in visualization routine: in measurementData file, if same simulationConditionId, but differing preequilibrationId etc. visualization
#2 opened Jul 5, 2019 by erikadudki
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