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Readme update with alternative graph example #14

Merged
merged 26 commits into from
Nov 20, 2023
Merged

Readme update with alternative graph example #14

merged 26 commits into from
Nov 20, 2023

Commits on Sep 20, 2023

  1. Readme update with alternative graph example

    @ConnorChato
    ConnorChato committed Sep 20, 2023
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Commits on Sep 25, 2023

  1. Clarify figure gen in README + fix growth vector order

    @ConnorChato
    ConnorChato committed Sep 25, 2023
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Commits on Oct 10, 2023

  1. Component Clustering algorithm updates

    @ConnorChato
    ConnorChato committed Oct 10, 2023
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  2. Self connect allowed in homogenization algorithm for comp clustering

    @ConnorChato
    ConnorChato committed Oct 10, 2023
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Commits on Nov 7, 2023

  1. revised docstring for create.graph

    @ArtPoon
    ArtPoon committed Nov 7, 2023
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  2. revised docstring for create.graph

    @ArtPoon
    ArtPoon committed Nov 7, 2023
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  3. starting to refactor component clustering workflow

    @ArtPoon
    ArtPoon committed Nov 7, 2023
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Commits on Nov 8, 2023

  1. refactored graph.setup.R

    @ArtPoon
    ArtPoon committed Nov 8, 2023
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  2. gitignore

    @ArtPoon
    ArtPoon committed Nov 8, 2023
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  3. resolved merge conflict

    @ArtPoon
    ArtPoon committed Nov 8, 2023
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  4. refactoring analysis.R

    @ArtPoon
    ArtPoon committed Nov 8, 2023
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  5. small

    @ArtPoon
    ArtPoon committed Nov 8, 2023
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  6. resolved merge conflict

    @ArtPoon
    ArtPoon committed Nov 8, 2023
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Commits on Nov 9, 2023

  1. successful run with example_tn93.txt

    @ArtPoon
    ArtPoon committed Nov 9, 2023
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  2. starting to work on tree setup

    @ArtPoon
    ArtPoon committed Nov 9, 2023
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Commits on Nov 10, 2023

  1. updated annotate.nodes and annotate.paths

    @ArtPoon
    ArtPoon committed Nov 10, 2023
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  2. gitignore update

    Connor Chato committed Nov 10, 2023
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  3. finished refactoring tree-setup.R, moving on to tree-clustering.R

    @ArtPoon
    ArtPoon committed Nov 10, 2023
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Commits on Nov 13, 2023

  1. some comments

    @ArtPoon
    ArtPoon committed Nov 13, 2023
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Commits on Nov 14, 2023

  1. bootstrap handling

    @ArtPoon
    ArtPoon committed Nov 14, 2023
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Commits on Nov 17, 2023

  1. rolling back changes in tree.setup and tree.clustering, restoring dat… 

    …a.table
    @ArtPoon
    ArtPoon committed Nov 17, 2023
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  2. missed a t

    @ArtPoon
    ArtPoon committed Nov 17, 2023
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Commits on Nov 18, 2023

  1. fixed typo in annotate.growth()

    @ArtPoon
    ArtPoon committed Nov 18, 2023
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Commits on Nov 19, 2023

  1. reverted to using data.table

    @ArtPoon
    ArtPoon committed Nov 19, 2023
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  2. merged iss12

    @ArtPoon
    ArtPoon committed Nov 19, 2023
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  3. resolved merge conflict

    @ArtPoon
    ArtPoon committed Nov 19, 2023
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