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PIPE-CLIP v1.1.0

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@bchen4 bchen4 released this 23 Sep 02:27
· 34 commits to master since this release

Code re-structure and bug fixes.

  • Fixed bugs in finding mutations when there are multiple consecutive insertions;
  • Added more options for startcoef for zero-truncated negative binomial regression to make sure program can converge;
  • Modified the algorithm to count coverage for each mutation site, improved speed;
  • Replace bar charts with log file;