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support logtGml2 from Cytobank xml #30

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mikejiang opened this issue Dec 8, 2017 · 1 comment
Open

support logtGml2 from Cytobank xml #30

mikejiang opened this issue Dec 8, 2017 · 1 comment

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@mikejiang
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We've been mostly dealing with the analysis using asinhtGml2 from cytobank. This is the first reported use case of logtGml2 . I will add the support shortly.

On 12/08/2017 11:45 AM, Dmitry Tebaykin wrote:

Ok, I was able to install the libraries from github. I now have:
flowWorkspace version 3.27.6
openCyto version 1.17.2
flowCore version 1.45.2

My original problem was not being able to import a Gating-ML 2.0 file from Cytobank into R, the error: Error in FUN(X[[i]], ...) :
Don't know how to inverse transformation: logtGml2

I was hoping the updated libraries would be able to deal with that, but the error persists.

mikejiang pushed a commit that referenced this issue Dec 9, 2017
mikejiang pushed a commit to RGLab/flowWorkspace that referenced this issue Dec 9, 2017
@mikejiang
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@dtebaykin, pull the latest CytoML (it should ask prompt you to update flowWorkspace)

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