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Alignment with Bioschemas profile Workflow 0.5 #81

Merged
merged 18 commits into from
Jul 30, 2020
Merged

Alignment with Bioschemas profile Workflow 0.5 #81

merged 18 commits into from
Jul 30, 2020

Commits on Jun 8, 2020

  1. Avoid subclass of SoftwareSourceCode 

    Remove Workflow and Script
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    stain committed Jun 8, 2020
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  2. Avoid @type arrays in Workflow, remove wf4ever types 

    As discussed in meeting 2020-05-28 we should reduce/avoid need for @type array

aligning with BioSchemas Workflow profile means we don't need wf4ever terms for Workflow or Script or Sketch, however at the cost of loosing some precision
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  3. BioSchemas Workflow example 

    This must be augmented for pending changes in 0.5 for `FormalParameter`
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  4. JSON-LD fixes in BioSchemas example

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  5. Example format and additionalType

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  6. FormalParameter properties format/additionalType 

    From draft of the draft BioSchemas profile Workflow 0.5

See also:
* <https://docs.google.com/spreadsheets/d/1VKntwxkgjvup6yfzaPZsBN3h5aKWU5nuTKGEds3GzeQ/edit>
* <https://docs.google.com/spreadsheets/d/1MBNye9xqXDAe2Q8uBtioY4-17J-vKV8UA_PNprSMAVY/edit>
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  7. tmp namespace for Workflow types, schema.org 8.0

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  8. more hyperlinks

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  9. Mapping to BioSchemas

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Commits on Jun 29, 2020

  1. Using non-existing http://schema.org/funding 

    ..although it is consistent with the http://schema.org/Grant example 3,
see schemaorg/schemaorg#383

Using https:/bioschemas.org/Workflow#input etc
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  2. Use Workflow 0.5 Workflow @type; arrays allowed 

    Added a softer distinction between workflow and script
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Commits on Jun 30, 2020

  1. mandatory -> valueRequired

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Commits on Jul 22, 2020

  1. Merge branch 'master' into bioschemas-workflow-0.5

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    stain committed Jul 22, 2020
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  2. ensure newline in end of context.jsonld

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    stain committed Jul 22, 2020
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  3. Use snaphot dates as in BioSchemas/bioschemas.github.io#304

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    stain committed Jul 22, 2020
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  4. Use ComputationalWorkflow 0.5-DRAFT-2020_07_21

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    stain committed Jul 22, 2020
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  5. Workflow -> ComputationalWorkflow

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    stain committed Jul 22, 2020
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  6. link for [additionalType]

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