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Installation: Conflicts found! #3

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jbernst opened this issue Mar 2, 2023 · 0 comments
Open

Installation: Conflicts found! #3

jbernst opened this issue Mar 2, 2023 · 0 comments

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@jbernst
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jbernst commented Mar 2, 2023

Hi all,

I am trying to install MitoSIS and ran in to a few problems, one of which I (believe) I solved and another that is currently holding up the installation process.

The first was that I was not able to install MitoZ using tar -jxvf MitoZ/version_2.4-alpha/release_MitoZ_v2.4-alpha.tar.bz2; I installed it separately and hopefully this works. I used MitoZ-3.5. Does this work with MitoSIS?

The second issue, and the current one, is that when I try to use conda env create -f mitosis_env.yml the solving of environments is returned with:

Found conflicts! Looking for incompatible packages.
This can take several minutes.  Press CTRL-C to abort.
Examining conflict for trinity pandas python ete3 numpy matplotlib spades dendropy: : 34it [04:10, 13.55s/i\ 
After this is it a few hundred lines listing hundreds of incompatibilities of packages (I can post this if needed), and then the environment is not created. Has anybody else encountered this error? Is there another way to create the environment?

Any help is appreciated. Thank you!

Best,
Justin

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