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TODO
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TODO
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A loose TODO list for Fiji
==========================
- fix z-project, split channels for virtual stacks
- fix substack maker for hyperstacks
- provide preview for auto threshold plugin
- provide a plugin that runs another plugin with a range of parameters
- add an installer (translate the original WinGit installer to Java, using the
progress infrastructure of the Fiji Updater; maybe need to use reflection
to access java.util.prefs.WindowsPreferences)
- win: verify that console window stays open when falling back to system Java
- TrakEM2: use CommandListener to override the "File>Save" menu item
- move Amira I/O into bio-formats already
- headless: should we activate "batch"?
- exclude ij.jar, headless.jar and precompiled/ij.jar from netbeans project
(otherwise Netbeans will not use the ImageJ it compiled itself)
- netbeans: exclude the classes found in src-plugins/ij/**/*.java from ImageJA/
- test Bilateral Filter
- Segmentation Editor fails
- Building "jars/fake.jar" on Windows should warn and resort to making
precompiled/fake.jar directly. Same goes for the Fiji launcher.
- add script recorder for the new scripting languages
- check which Reader Plugins do not extend ImagePlus
- extend GenericDialog to provide Help, Advanced button
- GenericDialog.addToolText()
- add tests (test that all plugins are found, test which image types
they support, add regression tests, if file importers return ImagePlus)
- in ImageJA: add isCanceled() method to SaveDialog (is getDirectory() == null).
- in ImageJA: what about a file extension based construct similar to
HandleExtraFileTypes for save? This would allow to work on top of custom
file formats seamlessly.
- reimplement TransformJ (Stephan Preibisch)
- look at ITK