Adopt standardized BIOMASS reaction names #175
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zakandrewking
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Sep 30, 2015
- Standardized names for biomass, sink, exchange, atpm, and demand reactions - Uses the prefixes EX_, DM_, SK_, BIOMASS_, and ATPM - If pseudoreactions have gpr's, then log a warning - If pseudoreactions have coefficients not 1 or -1, then log a warning - Closes SBRG/bigg_models#84, SBRG/bigg_models#149, SBRG/bigg_models#175
zakandrewking
added a commit
to SBRG/cobradb
that referenced
this issue
Sep 30, 2015
- Standardized names for biomass, sink, exchange, atpm, and demand reactions - Uses the prefixes EX_, DM_, SK_, BIOMASS_, and ATPM - If pseudoreactions have gpr's, then log a warning - If DM_, SK_, or EX_ have coefficients not 1 or -1, then log a warning - Closes SBRG/bigg_models#84, SBRG/bigg_models#149, SBRG/bigg_models#175
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/BIOMASS(_.+)?/.The text was updated successfully, but these errors were encountered: