Merge branch 'develop' into none_data_type_min

Conflicts:
  seed/static/seed/partials/data_quality_admin.html

.gitignore

@@ -13,6 +13,7 @@ coverage.protractor.json
 *.swp
 *.swo
 *.swn
+seed_issues.csv
 package-lock.json
 web_root/css/compressed.*.css
 web_root/js/compressed.*.js

.travis.yml

@@ -9,7 +9,7 @@ cache:
 os: linux
 language: python
 python:
-  - "3.6"
+  - "3.7"
 addons:
   chrome: stable
   postgresql: "11.2"

charts/admin/dev-namepsace.json

@@ -0,0 +1,10 @@
+{
+  "apiVersion": "v1",
+  "kind": "Namespace",
+  "metadata": {
+    "name": "development",
+    "labels": {
+      "name": "development"
+    }
+  }
+}

charts/backend/.helmignore

@@ -0,0 +1,23 @@
+# Patterns to ignore when building packages.
+# This supports shell glob matching, relative path matching, and
+# negation (prefixed with !). Only one pattern per line.
+.DS_Store
+# Common VCS dirs
+.git/
+.gitignore
+.bzr/
+.bzrignore
+.hg/
+.hgignore
+.svn/
+# Common backup files
+*.swp
+*.bak
+*.tmp
+*.orig
+*~
+# Various IDEs
+.project
+.idea/
+*.tmproj
+.vscode/

charts/backend/Chart.yaml

@@ -0,0 +1,21 @@
+apiVersion: v2
+name: backend
+description: A Helm chart for Kubernetes
+
+# A chart can be either an 'application' or a 'library' chart.
+#
+# Application charts are a collection of templates that can be packaged into versioned archives
+# to be deployed.
+#
+# Library charts provide useful utilities or functions for the chart developer. They're included as
+# a dependency of application charts to inject those utilities and functions into the rendering
+# pipeline. Library charts do not define any templates and therefore cannot be deployed.
+type: application
+
+# This is the chart version. This version number should be incremented each time you make changes
+# to the chart and its templates, including the app version.
+version: 0.1.0
+
+# This is the version number of the application being deployed. This version number should be
+# incremented each time you make changes to the application.
+appVersion: 1.16.0

charts/backend/templates/NOTES.txt

@@ -0,0 +1,21 @@
+1. Get the application URL by running these commands:
+{{- if .Values.ingress.enabled }}
+{{- range $host := .Values.ingress.hosts }}
+  {{- range .paths }}
+  http{{ if $.Values.ingress.tls }}s{{ end }}://{{ $host.host }}{{ . }}
+  {{- end }}
+{{- end }}
+{{- else if contains "NodePort" .Values.service.type }}
+  export NODE_PORT=$(kubectl get --namespace {{ .Release.Namespace }} -o jsonpath="{.spec.ports[0].nodePort}" services {{ include "backend.fullname" . }})
+  export NODE_IP=$(kubectl get nodes --namespace {{ .Release.Namespace }} -o jsonpath="{.items[0].status.addresses[0].address}")
+  echo http://$NODE_IP:$NODE_PORT
+{{- else if contains "LoadBalancer" .Values.service.type }}
+     NOTE: It may take a few minutes for the LoadBalancer IP to be available.
+           You can watch the status of by running 'kubectl get --namespace {{ .Release.Namespace }} svc -w {{ include "backend.fullname" . }}'
+  export SERVICE_IP=$(kubectl get svc --namespace {{ .Release.Namespace }} {{ include "backend.fullname" . }} --template "{{"{{ range (index .status.loadBalancer.ingress 0) }}{{.}}{{ end }}"}}")
+  echo http://$SERVICE_IP:{{ .Values.service.port }}
+{{- else if contains "ClusterIP" .Values.service.type }}
+  export POD_NAME=$(kubectl get pods --namespace {{ .Release.Namespace }} -l "app.kubernetes.io/name={{ include "backend.name" . }},app.kubernetes.io/instance={{ .Release.Name }}" -o jsonpath="{.items[0].metadata.name}")
+  echo "Visit http://127.0.0.1:8080 to use your application"
+  kubectl --namespace {{ .Release.Namespace }} port-forward $POD_NAME 8080:80
+{{- end }}

charts/backend/templates/_helpers.tpl

@@ -0,0 +1,63 @@
+{{/* vim: set filetype=mustache: */}}
+{{/*
+Expand the name of the chart.
+*/}}
+{{- define "backend.name" -}}
+{{- default .Chart.Name .Values.nameOverride | trunc 63 | trimSuffix "-" -}}
+{{- end -}}
+
+{{/*
+Create a default fully qualified app name.
+We truncate at 63 chars because some Kubernetes name fields are limited to this (by the DNS naming spec).
+If release name contains chart name it will be used as a full name.
+*/}}
+{{- define "backend.fullname" -}}
+{{- if .Values.fullnameOverride -}}
+{{- .Values.fullnameOverride | trunc 63 | trimSuffix "-" -}}
+{{- else -}}
+{{- $name := default .Chart.Name .Values.nameOverride -}}
+{{- if contains $name .Release.Name -}}
+{{- .Release.Name | trunc 63 | trimSuffix "-" -}}
+{{- else -}}
+{{- printf "%s-%s" .Release.Name $name | trunc 63 | trimSuffix "-" -}}
+{{- end -}}
+{{- end -}}
+{{- end -}}
+
+{{/*
+Create chart name and version as used by the chart label.
+*/}}
+{{- define "backend.chart" -}}
+{{- printf "%s-%s" .Chart.Name .Chart.Version | replace "+" "_" | trunc 63 | trimSuffix "-" -}}
+{{- end -}}
+
+{{/*
+Common labels
+*/}}
+{{- define "backend.labels" -}}
+helm.sh/chart: {{ include "backend.chart" . }}
+{{ include "backend.selectorLabels" . }}
+{{- if .Chart.AppVersion }}
+app.kubernetes.io/version: {{ .Chart.AppVersion | quote }}
+{{- end }}
+app.kubernetes.io/managed-by: {{ .Release.Service }}
+{{- end -}}
+
+{{/*
+Selector labels
+*/}}
+{{- define "backend.selectorLabels" -}}
+app.kubernetes.io/name: {{ include "backend.name" . }}
+app.kubernetes.io/instance: {{ .Release.Name }}
+{{- end -}}
+
+{{/*
+Create the name of the service account to use
+*/}}
+{{- define "backend.serviceAccountName" -}}
+{{- if .Values.serviceAccount.create -}}
+    {{ default (include "backend.fullname" .) .Values.serviceAccount.name }}
+{{- else -}}
+    {{ default "default" .Values.serviceAccount.name }}
+{{- end -}}
+{{- end -}}

charts/backend/templates/db-postgres-deployment.yaml

@@ -0,0 +1,51 @@
+apiVersion: extensions/v1beta1
+kind: Deployment
+metadata:
+  annotations:
+    kompose.cmd: kompose convert
+    kompose.version: 1.20.0 ()
+  creationTimestamp: null
+  labels:
+    io.kompose.service: db-postgres
+  name: db-postgres
+spec:
+  replicas: 1
+  strategy:
+    type: Recreate
+  template:
+    metadata:
+      annotations:
+        kompose.cmd: kompose convert
+        kompose.version: 1.20.0 ()
+      creationTimestamp: null
+      labels:
+        io.kompose.service: db-postgres
+    spec:
+      containers:
+      - env:
+        - name: POSTGRES_DB
+          value: seed
+        - name: POSTGRES_PASSWORD
+          value: super-secret-password
+        - name: POSTGRES_USER
+          value: seed
+        image: seedplatform/postgres-seed:11.2
+        name: db-postrgres
+#        command: ["tail"]
+#        args: ['-f', '/dev/null']
+        ports:
+        - containerPort: 5432
+        resources:
+          limits:
+            cpu: "300m"
+          requests:
+            cpu: "300m"
+        volumeMounts:
+        - mountPath: /var/lib/postgresql/data
+          name: seed-pgdata
+      restartPolicy: Always
+      volumes:
+      - name: seed-pgdata
+        persistentVolumeClaim:
+          claimName: seed-pgdata
+status: {}

charts/backend/templates/db-postgres-service.yaml

@@ -0,0 +1,19 @@
+apiVersion: v1
+kind: Service
+metadata:
+  annotations:
+    kompose.cmd: kompose convert
+    kompose.version: 1.20.0 ()
+  creationTimestamp: null
+  labels:
+    io.kompose.service: db-postgres
+  name: db-postgres
+spec:
+  ports:
+  - name: "5432"
+    port: 5432
+    targetPort: 5432
+  selector:
+    io.kompose.service: db-postgres
+status:
+  loadBalancer: {}

charts/backend/templates/db-redis-deployment.yaml

@@ -0,0 +1,28 @@
+apiVersion: extensions/v1beta1
+kind: Deployment
+metadata:
+  annotations:
+    kompose.cmd: kompose convert
+    kompose.version: 1.20.0 ()
+  creationTimestamp: null
+  labels:
+    io.kompose.service: db-redis
+  name: db-redis
+spec:
+  replicas: 1
+  strategy: {}
+  template:
+    metadata:
+      annotations:
+        kompose.cmd: kompose convert
+        kompose.version: 1.20.0 ()
+      creationTimestamp: null
+      labels:
+        io.kompose.service: db-redis
+    spec:
+      containers:
+      - image: redis:5.0.1
+        name: db-redis
+        resources: {}
+      restartPolicy: Always
+status: {}

charts/backend/templates/redis-service.yaml

@@ -0,0 +1,10 @@
+apiVersion: v1
+kind: Service
+metadata:
+  name: db-redis
+spec:
+  selector:
+    io.kompose.service: db-redis
+  ports:
+    - port: 6379
+      targetPort: 6379

charts/backend/templates/tests/test-connection.yaml

@@ -0,0 +1,15 @@
+apiVersion: v1
+kind: Pod
+metadata:
+  name: "{{ include "backend.fullname" . }}-test-connection"
+  labels:
+    {{- include "backend.labels" . | nindent 4 }}
+  annotations:
+    "helm.sh/hook": test-success
+spec:
+  containers:
+    - name: wget
+      image: busybox
+      command: ['wget']
+      args: ['{{ include "backend.fullname" . }}:{{ .Values.service.port }}']
+  restartPolicy: Never

charts/backend/values.yaml

@@ -0,0 +1,68 @@
+# Default values for backend.
+# This is a YAML-formatted file.
+# Declare variables to be passed into your templates.
+
+replicaCount: 1
+
+image:
+  repository: nginx
+  pullPolicy: IfNotPresent
+
+imagePullSecrets: []
+nameOverride: ""
+fullnameOverride: ""
+
+serviceAccount:
+  # Specifies whether a service account should be created
+  create: true
+  # Annotations to add to the service account
+  annotations: {}
+  # The name of the service account to use.
+  # If not set and create is true, a name is generated using the fullname template
+  name:
+
+podSecurityContext: {}
+  # fsGroup: 2000
+
+securityContext: {}
+  # capabilities:
+  #   drop:
+  #   - ALL
+  # readOnlyRootFilesystem: true
+  # runAsNonRoot: true
+  # runAsUser: 1000
+
+service:
+  type: ClusterIP
+  port: 80
+
+ingress:
+  enabled: false
+  annotations: {}
+    # kubernetes.io/ingress.class: nginx
+    # kubernetes.io/tls-acme: "true"
+  hosts:
+    - host: chart-example.local
+      paths: []
+  tls: []
+  #  - secretName: chart-example-tls
+  #    hosts:
+  #      - chart-example.local
+
+resources: {}
+  # We usually recommend not to specify default resources and to leave this as a conscious
+  # choice for the user. This also increases chances charts run on environments with little
+  # resources, such as Minikube. If you do want to specify resources, uncomment the following
+  # lines, adjust them as necessary, and remove the curly braces after 'resources:'.
+  # limits:
+  #   cpu: 100m
+  #   memory: 128Mi
+  # requests:
+  #   cpu: 100m
+  #   memory: 128Mi
+
+nodeSelector: {}
+
+tolerations: []
+
+affinity: {}

charts/frontend/.helmignore

@@ -0,0 +1,23 @@
+# Patterns to ignore when building packages.
+# This supports shell glob matching, relative path matching, and
+# negation (prefixed with !). Only one pattern per line.
+.DS_Store
+# Common VCS dirs
+.git/
+.gitignore
+.bzr/
+.bzrignore
+.hg/
+.hgignore
+.svn/
+# Common backup files
+*.swp
+*.bak
+*.tmp
+*.orig
+*~
+# Various IDEs
+.project
+.idea/
+*.tmproj
+.vscode/