NGI-MethylSeq v0.3.1

Minor release to include base profile name and documentation about Singularity. Also testing automated docker hub image tagging for releases.

NGI-MethylSeq v0.3

New in this version: Singularity support for UPPMAX! No more environment modules... 🎉

Other updates:

• Fix --rrbs mode
• Fixed fairly major bug where only a single sample would run past alignment
• Merged test scripts and rewrote to use command line flags / new travis script.
• Refactored software version collection code to be more resilient and cleaner / easier to maintain.

NGI-MethylSeq v0.2

First (semi-) stable release of the new NGI-MethylSeq pipeline, as we head towards deployment in production.