Merge pull request #73 from ewels/master

Define default params.splicesites.
SciLifeLab · Dec 14, 2016 · 7a7237e · 7a7237e
2 parents 5f322d2 + 0dd4e78
commit 7a7237e
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/main.nf b/main.nf
@@ -30,6 +30,7 @@ params.fasta = params.genome ? params.genomes[ params.genome ].fasta ?: false :
 params.gtf = params.genome ? params.genomes[ params.genome ].gtf ?: false : false
 params.bed12 = params.genome ? params.genomes[ params.genome ].bed12 ?: false : false
 params.hisat2_index = params.genome ? params.genomes[ params.genome ].hisat2 ?: false : false
+params.splicesites = false
 params.download_hisat2index = false
 params.download_fasta = false
 params.download_gtf = false
@@ -43,7 +44,7 @@ params.rlocation = false
 if (params.rlocation){
     nxtflow_libs = file(params.rlocation)
     nxtflow_libs.mkdirs()
-} 
+}
 
 def single
 params.sampleLevel = false