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GECKO v1.3.5
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@BenjaSanchez BenjaSanchez released this 03 May 14:40
v1.3.5
5c397aa
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  • Features:
    • Additional options for output tables from modifyKcats.m & topUsedEnzymes.m (PR #61)
    • keggID is now an input for updateDatabases.m (PR #62)
    • Backwards compatibility with any yeastGEM from 8.0.0 onwards (PR #66)
    • New utilities:
      • getSubset_ecModel.m, for getting context-specific ecModels (PR #64)
      • getKcat.m, for retrieving kcats (PR #67)
  • Fixes:
    • Fixed bug in aconitase kcat & misc. error handling (PR #62)
  • Refactoring:
    • Speed improvements in topUsedEnzymes.m (PR #61)
    • Reduced display of several functions (PR #62)
    • Simplified changeMedia_batch.m and made more generic constrainEnzymes.m & flexibilizeProteins.m (PR #63)
  • Style:
    • Changed EOL to LF (unix default) (PR #68)
  • Documentation:
    • Documented input/output of topUsedEnzymes.m & truncateValues.m (PR #61)
    • Added/updated documentation of changeMedia_batch.m, constrainEnzymes.m, flexibilizeProteins.m & getConstrainedModel.m (PR #63)
Assets 2