Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Funguild usage #77

Open
WillErickson1 opened this issue Oct 11, 2023 · 0 comments
Open

Funguild usage #77

WillErickson1 opened this issue Oct 11, 2023 · 0 comments

Comments

@WillErickson1
Copy link

WillErickson1 commented Oct 11, 2023 •
edited
Loading

Hello ,
thank you for this tool !!
I'm a little bit confused . when I should run this 2 commands:

python FUNGuild.py taxa -otu example/otu_table.txt -format tsv -column taxonomy -classifier unite
python FUNGuild.py guild -taxa example/otu_table.taxa.txt

and when this command : python Guilds_v1.0.py -otu /Users/username/Documents/project/otu_table_example.txt -db fungi -m -u
I need the chronological order

second question: what's the difference between FunGuild and picrust2 in this context
thank you in advance !
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@WillErickson1