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Tophat-fusion error #10
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Hi,
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The problem has been solved and can be run according to this version of the software
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Hello. The steps untill tophat fusion worked, but got an error after Tophat fusion: I used te Circ explorer2 command to get the gtf file: So I dont know whats going on. Why is the gtf file is giving the error. kindly help |
Maybe you can try another GTF file,I've met the same thing. |
i tried the reference gtf didn't work.
When you had the same problem what did you do?
…On Mon, Dec 28, 2020 at 12:03 PM xczhang ***@***.***> wrote:
Maybe you can try another GTF file,I've met the same thing.
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Sharmishtha Shyamal, PhD
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Hi, zxclovezby |
Traceback (most recent call last): Although I have installed tophat 2.0.12, samtools -0.1.18, and bowtie-1.0.0.0, I also encounter the same problem |
Hi,
In the mapping with tophat-fusion step, I get the below error:
I am not sure what the error says and how to fix it. Can you help?
@xingma
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