LowMACA.build

[Yikun]

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data LowMACA
###
##############################################################################
##############################################################################


* checking for file ‘LowMACA/DESCRIPTION’ ... OK
* preparing ‘LowMACA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘LowMACA.Rmd’ using rmarkdown
JobId: clustalo-R20230227-145726-0995-78167370-p1m
FINISHED
Creating result file: /tmp/RtmpuIRBhu/webClustal.out.txt
Creating result file: /tmp/RtmpuIRBhu/webClustal.sequence.txt
Creating result file: /tmp/RtmpuIRBhu/webClustal.aln-clustal.clustal
Creating result file: /tmp/RtmpuIRBhu/webClustal.phylotree.ph
Creating result file: /tmp/RtmpuIRBhu/webClustal.pim.pim
Creating result file: /tmp/RtmpuIRBhu/webClustal.submission.params
Quitting from lines 176-178 (LowMACA.Rmd) 
Error: processing vignette 'LowMACA.Rmd' failed with diagnostics:
Error in the HTTP2 framing layer
--- failed re-building ‘LowMACA.Rmd’

SUMMARY: processing the following file failed:
  ‘LowMACA.Rmd’

Error: Vignette re-building failed.
Execution halted

[martin-g]

x86_64 fails in a different way.

[martin-g]

The issue here seems to be a temporary network glitch. I've tested build and check few times and there was no issue!

[martin-g]

The LowMACA package is deprecated in Bioc 3.18. The maintainer does not respond.