Skip to content

Sample Meta Data

mattjones315 edited this page Aug 18, 2017 · 1 revision

Covariates for each sample to also evaluate against projections. This is where you can input information such as time or stimulus or batch

Text, Tab-delimited

First line is a tab-separated list of sample labels. Labels here should match sample labels in the expression data matrix file. Each subsequent line contains:

<Name> TAB <Signature Type> TAB <Value for sample 1> TAB <Value for sample 2> TAB … etc

should be either “numerical” or “factor” Numerical signature values must be parse-able to a float. Factors can be anything (including numbers), and are treated differently with regards to calculating significance of signature/projection pairings.

Example:

S1 S2 S3 S4 ...
Type Factor Wild Wild KO Wild ...
Time Numerical 0 4 4 6 ...
Cluster Factor 11 7 1 8 ...
Clone this wiki locally