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[25.0 Release] Hotfixes for demo #8840

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merged 1 commit into from Aug 8, 2023
Merged

[25.0 Release] Hotfixes for demo #8840

merged 1 commit into from Aug 8, 2023

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ridz1208
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@ridz1208 ridz1208 commented Jul 19, 2023 •
edited

Brief summary of changes

  1. RESET FOREIGN KEY CHECKS TO 1 !!!IMPORTANT!!! @laemtl please review asap
  2. Fixes 9999 drop tables, adds omitted tables in appropriate order
  3. adds editor config setting for YML files
  4. recreate release patch in correct chronological order
  5. restore publication patch accidentally added to cleanups (publication module should be re-tested)
  6. remove instrument permissions from config.xml for RB
  7. remove corrupting old subproject files from RB
  8. update migration.md

@driusan
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driusan commented Jul 19, 2023

PHPCS is failing

FILE: ...e/runner/work/Loris/Loris/tools/exporters/DB_dump_table_data.php
----------------------------------------------------------------------
FOUND 6 ERRORS AFFECTING 2 LINES
----------------------------------------------------------------------
 97 | ERROR | [x] Spaces must be used to indent lines; tabs are not
    |       |     allowed
 97 | ERROR | [x] Multi-line function call not indented correctly;
    |       |     expected 8 spaces but found 1
 97 | ERROR | [x] Line indented incorrectly; expected at least 4
    |       |     spaces, found 1
 98 | ERROR | [x] Spaces must be used to indent lines; tabs are not
    |       |     allowed
 98 | ERROR | [x] Multi-line function call not indented correctly;
    |       |     expected 8 spaces but found 1
 98 | ERROR | [x] Line indented incorrectly; expected at least 4
    |       |     spaces, found 1
----------------------------------------------------------------------
PHPCBF CAN FIX THE 6 MARKED SNIFF VIOLATIONS AUTOMATICALLY
----------------------------------------------------------------------

driusan
driusan reviewed Jul 19, 2023
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SQL/Release_patches/24.1_To_25.0_upgrade.sql
@@ -498,7 +451,8 @@ INSERT INTO ConfigSettings
Name="gui";

INSERT INTO Config (ConfigID, Value) SELECT ID, 'false' FROM ConfigSettings WHERE Name="useEEGBrowserVisualizationComponents";
CREATE INDEX `i_violations_resolved_extid_type` ON `violations_resolved` (`ExtID`, `TypeTable`);

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I don't think we should be changing this. Was there a problem with the order that it was, even if it wasn't chronological? That's the order that the patch was in when it was tested.

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we don't know.... we were disabling foreign keys in the same patch

driusan
driusan reviewed Jul 19, 2023
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raisinbread/RB_files/RB_ConfigSettings.sql Outdated
@@ -118,6 +118,6 @@ INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMult
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (128,'default_cohort','Default cohort used when creating scan visit',1,0,'text',69,'Default cohort',13);
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (129,'UserMaximumDaysInactive','The maximum number of days since last login before making a user inactive.',1,0,'text',1,'Maximum Days Before Making User Inactive',30);
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (130,'DownloadPath','Where files are downloaded',1,0,'text',26,'Downloads',4);
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (131,'EEGUploadIncomingPath', 'Path to the upload directory for incoming EEG studies', 1, 0, 'text', 26, 'EEG Incoming Directory', 15);
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (131,'EEGUploadIncomingPath','Path to the upload directory for incoming EEG studies',1,0,'text',26,'EEG Incoming Directory',15);
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Can you move all the RB changes to a different PR? I think that can be merged pretty easily.

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yes easy

driusan
driusan reviewed Jul 19, 2023
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SQL/Archive/25.0/2022-03-03-AddHEDTags.sql
@@ -44,6 +44,7 @@ INSERT INTO physiological_event_file (PhysiologicalFileID, FilePath, FileType)
UPDATE physiological_task_event te
SET EventFileID=(SELECT EventFileID FROM physiological_event_file WHERE PhysiologicalFileID=te.PhysiologicalFileID)
;
SET FOREIGN_KEY_CHECKS= 1;
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I don't get why this is flagged as "IMPORTANT" in the description. It's a session variable, it'll be re-enabled after the patch is sourced even with this missing.

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@ridz1208 ridz1208 Jul 19, 2023 •
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the patch is the entire release patch because its concatenated into it. it also happens to be one of the first statements

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I think it is fine, the FOREIGN_KEY_CHECKS is disabled for the same set of statements on both patches.

@driusan driusan merged commit 28ae33e into aces:25.0-release Aug 8, 2023
38 checks passed
@ridz1208 ridz1208 added this to the 25.0.1 milestone Nov 9, 2023
kongtiaowang pushed a commit to kongtiaowang/Loris that referenced this pull request Nov 29, 2023
@ridz1208 @kongtiaowang
[25.0 Release] Hotfixes for demo (aces#8840)
cfd5dde 
1. RESET FOREIGN KEY CHECKS TO 1 !!!IMPORTANT!!! @laemtl please review asap
2. Fixes 9999 drop tables, adds omitted tables in appropriate order
3. adds editor config setting for YML files
4. recreate release patch in correct chronological order
5. restore publication patch accidentally added to cleanups (publication module should be re-tested)
6. remove instrument permissions from config.xml for RB
7. remove corrupting old subproject files from RB
8. update migration.md
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