-
Notifications
You must be signed in to change notification settings - Fork 0
/
NAMESPACE
83 lines (82 loc) · 2.1 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
# Generated by roxygen2: do not edit by hand
S3method(print,EpiSewerJob)
S3method(print,EpiSewerJobResult)
S3method(print,modeldata)
S3method(print,modelstructure)
S3method(print,tbc)
S3method(print,tbe)
S3method(print,tbp)
S3method(run,EpiSewerJob)
S3method(run,EpiSewerJobResult)
S3method(test_run,EpiSewerJob)
S3method(test_run,EpiSewerJobResult)
export(EpiSewer)
export(LOD_assume)
export(LOD_estimate_dPCR)
export(LOD_none)
export(R_estimate_approx)
export(R_estimate_ets)
export(R_estimate_rw)
export(R_estimate_splines)
export(component_functions)
export(concentrations_observe)
export(flows_assume)
export(flows_observe)
export(generation_dist_assume)
export(get_checksums)
export(get_discrete_gamma)
export(get_discrete_gamma_shifted)
export(get_discrete_lognormal)
export(get_stan_model)
export(horizon_assume)
export(horizon_none)
export(incubation_dist_assume)
export(infection_noise_estimate)
export(infection_noise_none)
export(load_per_case_assume)
export(load_per_case_calibrate)
export(load_variation_estimate)
export(load_variation_none)
export(mark_outlier_spikes_median)
export(model_forecast)
export(model_infections)
export(model_measurements)
export(model_sampling)
export(model_sewage)
export(model_shedding)
export(model_stan_opts)
export(modeldata_init)
export(noise_estimate)
export(noise_estimate_constant_var)
export(noise_estimate_dPCR)
export(plot_LOD)
export(plot_R)
export(plot_concentration)
export(plot_doubling_time)
export(plot_growth_rate)
export(plot_growth_report)
export(plot_infections)
export(plot_load)
export(plot_prior_posterior)
export(plot_sample_effects)
export(residence_dist_assume)
export(run)
export(sample_effects_estimate_matrix)
export(sample_effects_estimate_weekday)
export(sample_effects_none)
export(sampler_stan_mcmc)
export(seeding_estimate_constant)
export(seeding_estimate_rw)
export(set_fit_opts)
export(set_results_opts)
export(sewer_assumptions)
export(sewer_compile)
export(sewer_data)
export(shedding_dist_assume)
export(suggest_load_per_case)
export(summarize_fit)
export(test_run)
exportClasses(EpiSewerJob)
exportClasses(EpiSewerJobResult)
import(data.table)
import(ggplot2)