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Not compatible with intervaltree >v3 #2

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charlesfoster opened this issue Jul 6, 2021 · 2 comments
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Not compatible with intervaltree >v3 #2

charlesfoster opened this issue Jul 6, 2021 · 2 comments
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@charlesfoster
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Hi,
Just a quick note that gappy2 won't run with intervaltree >v3.0 since "the search(begin, end, strict) method no longer exists": https://pypi.org/project/intervaltree/

Charles
@alexdonath alexdonath added the bug Something isn't working label Jul 6, 2021
@alexdonath
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Hi Charles,

Thanks a lot for reporting this. I'll fix it.

Alex

@alexdonath
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Done.

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@alexdonath @charlesfoster